| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1816 |
|---|
| Symbol | |
|---|
| ID | 6243307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2075672 |
|---|
| End bp | 2076577 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642593606 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001858044 |
|---|
| Protein GI | 186476574 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.762546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.245875 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACATTT TCGTCACTGG CGCGAGCGGC TTTATCGGCG GGTCGATTGC AGCGGGTCTC
GTGCGCGCGG GTCATCGCGT GACGGGCCTG ATCCGTAACC CCGAACACGC GGCCGAACTG
AAGCGCCTCG GCATCGAGCC CGTCGTCGGC ACGCTCGACG ACCGCGAGCT GCTCATCGCG
CAGGCGCAGG CCGCCGACGC CGTCATCAAC GCGGCGAGCA GCGATCACCG CGGGGCCGTC
GAAGCACTGA TCGACGCGCT CGCCGGCTCG AACAAGCCGT TCCTGCATAC CAGTGGTTCG
AGCATCGTCG GCGATGCGTC AGGCGGCGAA CGCGGTGAAG CGAAGATCTA TACGGAAGAT
GCGCTGCCCC AACCGACAGC CGACAAGGCG CCCCGCGTCG CGATCGACCA TCTCGTGCTC
GATGCAGCGA AGCGCGGCAT CCGCTCGTCG GTGCTGTGCA ATACGCTGAT CTACGGGCAC
GGCGCGGTCA AAGGCAGCGC GAGCGTGCAG TTGCCGCGCC TCGTGCGGCA GGCGCAAAAA
AGCGGCATCG TGCGGCACGT GGGCAGCGGC GGCAACATCT GGTCGAACGT GTTCATCGAC
GACGTGGTCG AGCTATACCG CCTCGCGCTC GAGAAAAGCC CCGCAGGGAC GTTCTATTTC
GTCGAAAGCG GCGAAGCGTC GTTCCGCGAG ATGGCGGATG CGATCGCGCA GGCGATGCAT
CTCGGCCCGG CGCAGGACTG GCCGCTCGAT CAGGCGATAG GCGAATGGGG CTATGAAATG
GCGTCGTACG GACTCGGCTC GAACAGCCGC GTGCGCGGCA CTCGCGCCCG TACGCTGCTC
GGCTGGCAGC CGGCGCGCAC GTCGGTGATC GAGTGGATCG AACACGACAT GATGAAGGGC
GCGTAA
|
|---|
| Protein sequence | MNIFVTGASG FIGGSIAAGL VRAGHRVTGL IRNPEHAAEL KRLGIEPVVG TLDDRELLIA
QAQAADAVIN AASSDHRGAV EALIDALAGS NKPFLHTSGS SIVGDASGGE RGEAKIYTED
ALPQPTADKA PRVAIDHLVL DAAKRGIRSS VLCNTLIYGH GAVKGSASVQ LPRLVRQAQK
SGIVRHVGSG GNIWSNVFID DVVELYRLAL EKSPAGTFYF VESGEASFRE MADAIAQAMH
LGPAQDWPLD QAIGEWGYEM ASYGLGSNSR VRGTRARTLL GWQPARTSVI EWIEHDMMKG
A
|
|---|
| |