Gene Bphy_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1813 
Symbol 
ID6243304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2073014 
End bp2073718 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID642593603 
Producthistidine utilization repressor 
Protein accessionYP_001858041 
Protein GI186476571 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.167757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCA TGAACGCACC GGCTTATCAG GGAATCAAGG ACTTCATCCT CGCCCGCATT 
CACGCGGGCG AATGGAGCGA AGGCCATCAG GTTCCATCGG AAAACGAGCT TGCGCGCGAA
TTCAACGTCG CGCGCATGAC GGTCAACCGG GCGCTGCGCG AGCTGACGGC CGAGCAGGTG
CTGACGCGCG TTCAGGGCTC GGGCACGTTC GTCGCGCGAC CGAAGTACGA GTCGACGCTA
GTCGCGATCC GCAGCATTTC CGACGAGATC GTCGCGCGCG GTCATTGCTA TCACGCGAAC
GTGCTGCACG TGGGCGCCGC GATCGCCGAC GAAGAACTCG CCGCCGAAAT GCAGGTGAGC
GCGGGCAGTC CCGTCTTCCA TTCGCGCGTG CTGCACTTCG AGAACGACGA GCCCGTCCAG
CTCGAAGAGC GCTGGGTGAA TCCCGTCGTC GCCCCCGACT ATGCGCTGCA GGACTTCACG
AACACGACAC CTAACCAGTA TCTCGTGCGC GTCGCGCCGC TGCAGCGCGT TGAGTACCGC
ATCGAAGCCT CCGCGCCGGA CGCCGACAAC CGCCGGCTTC TGACGATGGA CGACGCCGAA
CCTTGCCTCG TGCTGCACCG GCGCACGTGG TCGCAAGGGG TGGTCGCGTC CGTGGCCAAT
CTCTGGCACC CCGGCAACCG TTACCGGTTC ACCGGCCACT TCTGA
 
Protein sequence
MPSMNAPAYQ GIKDFILARI HAGEWSEGHQ VPSENELARE FNVARMTVNR ALRELTAEQV 
LTRVQGSGTF VARPKYESTL VAIRSISDEI VARGHCYHAN VLHVGAAIAD EELAAEMQVS
AGSPVFHSRV LHFENDEPVQ LEERWVNPVV APDYALQDFT NTTPNQYLVR VAPLQRVEYR
IEASAPDADN RRLLTMDDAE PCLVLHRRTW SQGVVASVAN LWHPGNRYRF TGHF