Gene Bphy_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1789 
Symbol 
ID6243280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2045021 
End bp2045812 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID642593579 
ProductABC transporter related 
Protein accessionYP_001858017 
Protein GI186476547 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.767906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCCACA CGACTCAAAC GGAAGCCTGC AAGCTCGCCG TGCAGGACAT CCACAAGCGC 
TATGGCGACA ACGAAGTGCT GAAGGGCGTC TCGCTGAATG CCAACAAGGG CGACGTGATC
AGCATCATCG GGGCGAGCGG GTCGGGCAAG AGCACCTTCC TGCGCTGCAT CAACTTTCTC
GAGCGGCCGA ACGCCGGGCA GATCGTCGTC GACGGCGAAG CGGTGCGCAC GAAAACCGAC
CGCCACGGCA ACTTCGAGGT CGCGGACCAC AAGCAACTGC AGCGCATCCG CACGAAACTC
GCGATGGTGT TCCAGCACTT CAACCTGTGG GCGCACATGA ACGTGCTGGA GAACGTGGTC
GAGGCGCCGA TCCACGTGCT CGGCGTGCCG CGCAAGGAAG CGGAAGACCG TGCCCGCGAG
TACCTGGAGA AAGTCGGCCT TGCGCCGCGT CTGGAGAAGC AGTATCCGTC GCACCTGTCG
GGCGGCCAGC AGCAGCGCGT CGCGATTGCG CGCGCGCTGG CGATGAACCC GGACGTGATG
CTGTTCGACG AGCCGACTTC CGCGCTCGAT CCCGAACTGG TCGGCGAGGT GCTGAAGGTG
ATGCAGAAGC TCGCTGAAGA AGGCCGCACG ATGATTGTCG TGACGCACGA AATGGGCTTT
GCGCGCAACG TGTCGAACCA TGTGATGTTC CTGCATCAGG GGCGCACGGA AGAAGAGGGC
GTGCCGTCGG AAGTGCTGGT GACGCCGAAG AGCGAACGCC TGAAGCAGTT CCTGTCCGGC
AGCCTCAAGT AA
 
Protein sequence
MLHTTQTEAC KLAVQDIHKR YGDNEVLKGV SLNANKGDVI SIIGASGSGK STFLRCINFL 
ERPNAGQIVV DGEAVRTKTD RHGNFEVADH KQLQRIRTKL AMVFQHFNLW AHMNVLENVV
EAPIHVLGVP RKEAEDRARE YLEKVGLAPR LEKQYPSHLS GGQQQRVAIA RALAMNPDVM
LFDEPTSALD PELVGEVLKV MQKLAEEGRT MIVVTHEMGF ARNVSNHVMF LHQGRTEEEG
VPSEVLVTPK SERLKQFLSG SLK