| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1777 |
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| Symbol | |
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| ID | 6243268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 2029702 |
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| End bp | 2031531 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642593567 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001858005 |
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| Protein GI | 186476535 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.607635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA CCAGGATCAC CCCAGCCCGC CGGGGCTTGC TGCGCACGGC GATCGACCGA
TTGCGCGCGG TCCGTCAGCC CGCACGCGCG ACGGTTGCGC CGGGCACGCC AGCCGTCTCG
CACGGGCTCG AACAGGCCGC AGGCGCCGTC GACTTCCTCG CGCATGTAGC TCACAATCTC
ACCTTTCTAT ATGTCTCCGA CGCGAGCCTG CGCTTTATCG GCTACCACCG GGAATATCTG
CAAACGGTCA CGCTGCACGA ACTCGTCGCG CCAGGCGACG TAGCGCGGCT GGACGCCGCA
CTGCGCCGCG CCGACGAAAG CGGCGCCGTC GAAAAAATCA CGCTGGACCT GATCAAGTCG
CTGACCTATC CCGTGCCTGT CGAGCTGCGT ATCGCGCGCA ACTGCCACGA CGGCATCGAG
GGCTACGCGA TCGCCGGCTT CGACGTGTCG AGCTGGCGCG CGACAGAAGC GAGCCTCAAA
CATCAGCTGC ATCACGACAA TCTGACGGGC CTCGCGAACG TGCCCGCCCT CGTCGAGGAA
ATGCGCCACG CGCAACAGAA GGCGGATGCA ACAGGCAAGT CCGCTGCCCT GCTGCTGCTC
GATATCGACG ACTACCAGCG CGTGAACCGC GCGCTCGGCT ACGACGCGGG CGACGAGATG
CTGCGCGATA CCGCCCGGCG CCTGTCTAAC ATGACGACGC AAGGCGAAGT GATCGCGCGC
ATCTCCAGCG ACGAATTCGC GATCCTGCTG CCACCCGTGC ACGCCCGTGC CGACACGGCG
TTGGCCGCCG AAGCGCTCGC GCGGCGTCTA TTGACGGCCA TCCAGCAGCC GTACACGTTT
AACCGGCAGC CAGTCCATCT GTCGGCGAGC GTCGGCATCG CGCTCTATCC GGACACGCAG
CAGGCGGGCG AATCGCCCGA TGCGCCGCCG CGCGACAGCC AGCTGCTGCG CTGGGCCGAT
TATGCGCTGT CGCGCGCGAA GGCAGCGGGC GGCAACACGC TCGCGTTCTA CATGCCCGAC
GACAGCCCCG CCGACGCCGA ACGTCTGAAG CTCGAATCGG ACCTGTACGA CGGCGTGCGC
AACGGCGAGT TTTCGCTGCA CTTCCAGCCG ATCACGAGCA GCCAGACCCG CGGCGTGGTC
GGCGTCGAGG CGCTGATCCG CTGGCAGCAT CCCGTGCACG GGCTCGTGCC GCCGTCGATG
TTCATTCCCC TCGCCGAATC CGTCGGTCTC ATCAACTACC TGGGCAACTG GGTGCTGAAG
GCCGCGTGCA TGCAGCTGAT CCGCTGGGAC ACGCAAGGCA TCCGGCTGCA ATACGTCGCC
GTGAATGTGT CGCCGCAGCA GTTCCGCGAC CCGCGCTTCA AGGAAAGCGT GCGCGAAGCG
ATCGCACTGA CGGGCATCGA CCCGCACCGG CTCGTGTTCG AGATCACGGA AAGCCTGCTG
ATGCATGACC CGCAGCACGC GACCACGCTG CTCGAAGAAC TGACAGGCCT CGGCATCCGC
TTCGCCGTCG ACGATTTCGG CACCGGCTAT TCGAGCCTTG CGTATCTGCA ACGCTTTCCG
CTCGCCAAGT TGAAAATCGA CCGGAGTTTT GTGGAGAATC TGCTAACCTC GCGCAACGAT
CAGGCGATCG TCAGCGCCGT GGTGGGTCTT GCGCAGACGC TCGACCTCGA ACTCGTCGCG
GAAGGTGTCG AGACGGAAGC ACAACGCGAC CTGCTGACCG AGATGGGCTG CGACCACATT
CAGGGCTGGC TCGTCTGCAA GGCACTGCCA TCGGAAGAAC TCGCGCAGCG TTTCGAATCG
CGCGCGCTTC ATGTGCATGG TGAAGCGTGA
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| Protein sequence | MEATRITPAR RGLLRTAIDR LRAVRQPARA TVAPGTPAVS HGLEQAAGAV DFLAHVAHNL
TFLYVSDASL RFIGYHREYL QTVTLHELVA PGDVARLDAA LRRADESGAV EKITLDLIKS
LTYPVPVELR IARNCHDGIE GYAIAGFDVS SWRATEASLK HQLHHDNLTG LANVPALVEE
MRHAQQKADA TGKSAALLLL DIDDYQRVNR ALGYDAGDEM LRDTARRLSN MTTQGEVIAR
ISSDEFAILL PPVHARADTA LAAEALARRL LTAIQQPYTF NRQPVHLSAS VGIALYPDTQ
QAGESPDAPP RDSQLLRWAD YALSRAKAAG GNTLAFYMPD DSPADAERLK LESDLYDGVR
NGEFSLHFQP ITSSQTRGVV GVEALIRWQH PVHGLVPPSM FIPLAESVGL INYLGNWVLK
AACMQLIRWD TQGIRLQYVA VNVSPQQFRD PRFKESVREA IALTGIDPHR LVFEITESLL
MHDPQHATTL LEELTGLGIR FAVDDFGTGY SSLAYLQRFP LAKLKIDRSF VENLLTSRND
QAIVSAVVGL AQTLDLELVA EGVETEAQRD LLTEMGCDHI QGWLVCKALP SEELAQRFES
RALHVHGEA
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