Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1725 |
Symbol | |
ID | 6243216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1966850 |
End bp | 1968070 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642593515 |
Product | efflux pump membrane protein |
Protein accession | YP_001857953 |
Protein GI | 186476483 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CCCAACAACC CGCGAACGCG CAGCCGGCCA GCAACGGCAA ACGCAAGCGC ATGATGACGC TGCTCGTCAT CGTGATCCTG ATTGCCGCGA TTGCTTACGG CCTCTACTAC TTCCTCGTCG CGCGGTTCCA TGAGGACACC GACGACGCAT ACGTGAACGG CAACATCGTC CAGATCACGC CGCAGGTGAC GGGCACGGTG ATCGCAGTGA ACGCGGACGA TACCCAGACC GTCAAGGCGG GCGATCCCCT CGTGGTGCTC GATCCGGCGG ATTCGCGCAT CGCGCTGCAA TCGGCGGAAG CGAACCTTGG CCAGGTCGTG CGCCAGGTGC GTGGCCTGTA CGCGGACGAC AGCCAGTATC AGGCGCAGGT CGCCGTGCGT CAGGCGGATC TGTCGCGCGC TCAGGACGAC CTGAAGCGCC GCATGCAGGT TGCGCAGACG GGCGCCGTCT CGCAGGAAGA AATCTCCCAC GCTCGCGACG CCGTCAAGAG CGCGCAAGCC GCGCTCGACG CTGCGCAGCA GCAGCTCGCG TCCAACCGTG CGTTGACGGC GAACACGACC ATCGCGAGCC ATCCGAACGT GCAGGCCGCG GCCGCGCGGG TTCGCGACGC GTATCTGAAC AACGCGCGCA ATACGCTGCC CGCGCCGGTG ACGGGCTATG TCGCGAAACG TTCGGTGCAG GTCGGCCAGC GCGTCGCGCC GGGTAATCCG TTGATGGCGA TCGTGCCGCT GAACGCCGTC TGGGTCGATG CGAACTTCAA GGAAGTGCAG CTCAAGCACA TGCGCATCGG TCAACCCGTC GAACTGACAG CGGACGTGTA CGGTTCATCC GTCAAGTATC GCGGCAAGGT GGTCGGCTTC TCGGCGGGTA CGGGCTCGGC GTTTTCGCTG CTGCCGGCGC AGAACGCGAC GGGTAACTGG ATCAAGGTCG TGCAGCGTCT GCCCGTGCGC ATCGCGCTGG ATCCGCAGGA ACTCGAGAAG CATCCGCTGC GCATCGGCCT GTCGATGCAG GTCGATGTGA GCATCAAGGA CGATACGGGC GGCGAGCTCG GCAACGCCGC GAACACGGTC TATCAGACCA ATGTCTTCGA CAAATACGGC GACCAGGCCG ACGCGGAGAT CGCCCGCATC ATCGCCGAGA ACGCCGGTCC GAACGCTGGC CAGCCGCAAA AGGCGGCAAG CGGCGCGAAG ACGGCCGCGA AGCTGATGTA A
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Protein sequence | MSTPQQPANA QPASNGKRKR MMTLLVIVIL IAAIAYGLYY FLVARFHEDT DDAYVNGNIV QITPQVTGTV IAVNADDTQT VKAGDPLVVL DPADSRIALQ SAEANLGQVV RQVRGLYADD SQYQAQVAVR QADLSRAQDD LKRRMQVAQT GAVSQEEISH ARDAVKSAQA ALDAAQQQLA SNRALTANTT IASHPNVQAA AARVRDAYLN NARNTLPAPV TGYVAKRSVQ VGQRVAPGNP LMAIVPLNAV WVDANFKEVQ LKHMRIGQPV ELTADVYGSS VKYRGKVVGF SAGTGSAFSL LPAQNATGNW IKVVQRLPVR IALDPQELEK HPLRIGLSMQ VDVSIKDDTG GELGNAANTV YQTNVFDKYG DQADAEIARI IAENAGPNAG QPQKAASGAK TAAKLM
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