Gene Bphy_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1719 
Symbol 
ID6243210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1956318 
End bp1957748 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content63% 
IMG OID642593509 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001857947 
Protein GI186476477 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG AATTTGACGT CGTCGTGATC GGTGCCGGTC CCGGCGGCTA CATCGCGGCC 
ATTCGCGCTG CGCAGCTCGG CAAGACGGTT GCCTGTATCG AAAAGTGGAA GAACCCGGCC
GGCGCGCTGA AGCTGGGCGG CACGTGCCTG AACGTCGGCT GCATTCCGTC GAAGGCGCTG
CTCGCGTCGT CGGAAGAATT CGAGAACGCA TCGCATCACC TCGCGGACCA CGGCATCAGC
GTGGAGAACG TGAAGGTCGA CATCGCGAAG ATGCTGGCCC GCAAGGAAGG CATCGTCGAG
AAGATGACGA AGGGCATCGA GTTCCTGTTC CGCAAGAACA AGATCACGTG GCTCAAGGGT
CATGGCAAGT TCACGGGCAA GACGGACGCC GGCGTGCAGA TCGAAGTGTC GGGCGAAGGC
GAGACGGAAG TGGTCACGGC GAAGAACGTG ATCATTGCGA CGGGCTCGAA GGCGCGTCAC
CTGCCGAACG TGCCCGTCGA CAACAAGATC GTCGCGGACA ACGAAGGCGC ACTGTCGTTC
ACCGAAGTGC CGAAGAAGCT CGCCGTGATC GGCGCGGGCG TGATCGGCCT GGAGTTGGGC
TCGGTGTGGC GCCGCCTGGG TGCGGAAGTG ACCGTGCTGG AAGCGCTGCC CGAGTTCCTC
GGCGCCGCCG ACCAGGCGCT CGCGAAGGAA GCCGCGAAGC AGTTCAAGAA GCAGGGTCTC
GACATCCACG TCGGCGTGAA GGTCGGCGAA GTCAAGACCA CGGCCAACAG CGTGTCGATC
TCGTACACGG ACAAGGACGG TAACGCGAAG ACGCTCGACG CGGACCGCCT GATCGTGTCG
ATCGGCCGCG TGCCGAACAC CGATAACCTG GGCCTCGAAG CGATTGGCCT GAAGGCGAAC
GAGCGCGGCT TCATCGACGT GGATGACCAC TGTGCAACGT CGGTGCCGAA CGTGTACGCG
ATCGGCGACG TGGTGCGTGG CCCGATGCTC GCCCACAAGG CCGAAGACGA AGGCGTGCTG
GTCGCGGAAG TGATCGACGG TCAGAAGCCG CACATCGATT ACAACTGCGT GCCGTGGGTC
ATCTACACGG AACCGGAAAT CGCGTGGGTC GGCAAGACGG AACAGCAGCT CAAGGCGGAA
GGCCGCGAGA TCAAGTCCGG CCAGTTCCCG TTCATGGCGA ACGGCCGCGC ACTCGGCATC
AACAAGGCGG ATGGCTTCGT CAAGATGATC GCCGACGCGA AGACGGACGA ACTGCTCGGC
GTGCACATCA TCGCTGCCAA CGCGTCGGAT CTGATCGCCG AAGCCGTGGT CGCGATGGAG
TTCAAGGCTG CGTCGGAAGA CATCGGCCGT ATCTGCCATC CGCACCCGTC GTTGTCCGAA
GTGATGCGTG AAGCGGCGCT CGCCGTCGAT AAGCGCGCGC TGAACATGTA A
 
Protein sequence
MSKEFDVVVI GAGPGGYIAA IRAAQLGKTV ACIEKWKNPA GALKLGGTCL NVGCIPSKAL 
LASSEEFENA SHHLADHGIS VENVKVDIAK MLARKEGIVE KMTKGIEFLF RKNKITWLKG
HGKFTGKTDA GVQIEVSGEG ETEVVTAKNV IIATGSKARH LPNVPVDNKI VADNEGALSF
TEVPKKLAVI GAGVIGLELG SVWRRLGAEV TVLEALPEFL GAADQALAKE AAKQFKKQGL
DIHVGVKVGE VKTTANSVSI SYTDKDGNAK TLDADRLIVS IGRVPNTDNL GLEAIGLKAN
ERGFIDVDDH CATSVPNVYA IGDVVRGPML AHKAEDEGVL VAEVIDGQKP HIDYNCVPWV
IYTEPEIAWV GKTEQQLKAE GREIKSGQFP FMANGRALGI NKADGFVKMI ADAKTDELLG
VHIIAANASD LIAEAVVAME FKAASEDIGR ICHPHPSLSE VMREAALAVD KRALNM