| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1709 |
|---|
| Symbol | |
|---|
| ID | 6243200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1949998 |
|---|
| End bp | 1950516 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593499 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001857937 |
|---|
| Protein GI | 186476467 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTCG AAGCTGAAGT GATTTCGTGG CTCCCGCAGT TGCGGCGCTA TGCGCGCGCA
CTGACGGGTG ACCCCGCATG GGCGGACGAC CTGGTTCAGG ATACGGCCGA GCGTGCGCTC
GCGCGCTGGA AAGGTTTCCG GCCCGACAGC AATCTTCGCG CGTGGCTGCT GACGATCCTG
CGGCACCTGT ACATCGATCA GCTGCGCGTG CGCCGCGAAA TCGCCGTCGA CGATGAAAGC
GCGCCGTGGC GCAATCTCGA GGCGCCGCGC GGCGAAGTCG ACGGCCTGGT GTTGCGCGAC
GTCCAGCGCG CGCTTTATTG TTTGCCCGTT GAGCAGCGGG AAGTGATGCT GCTCATTTGT
GTGGAGGAAT TGAGTTATCA GGAGGCGTCC GCGGCGCTCG GCGTGCCTAT CGGCACGGTG
ATGTCGCGAC TGTCTCGCGC CCGCGAACAC ATGCGGGCAT TGTTGACGGA GGGACCCGTG
CATAAGTCGC CGTCGCTGAA AGTGGTGAAG AGCAGGTGA
|
|---|
| Protein sequence | MNFEAEVISW LPQLRRYARA LTGDPAWADD LVQDTAERAL ARWKGFRPDS NLRAWLLTIL
RHLYIDQLRV RREIAVDDES APWRNLEAPR GEVDGLVLRD VQRALYCLPV EQREVMLLIC
VEELSYQEAS AALGVPIGTV MSRLSRAREH MRALLTEGPV HKSPSLKVVK SR
|
|---|
| |