| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1697 |
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| Symbol | |
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| ID | 6243188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1931729 |
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| End bp | 1934182 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642593485 |
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| Product | ribonuclease R |
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| Protein accession | YP_001857925 |
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| Protein GI | 186476455 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.892677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAAAT ATCCGTATCC GATTCCAAGC CGCGAAGAAA TCCTCGGCGT GCTGCGCACG
AGTGAAACGC CGCTTGCAGC GAACGACATC GCCGAAGCAC TGTCGATCAA GCGCCAGGAG
CGCGAAGGGT TTTTCAAGCG CCTCGCCGCG ATGGAGCGCG ATGGCCAGAT CAGACTCGAT
CAGCGCGGGC ATTACCAACT GACTCATCCG TCGAACTTCG TCGCGGGCCG CGTGCAGGGC
CATCGCGACG GCTACGGCTT TCTGATCCGC GACGACGGCC AGGACGACCT GTTCCTGCCG
ACGGGCGAAA TGCAGAAGGT CATGCACAAC GACCGCGTGC TCGCGCGCAT CGTCGGCTAT
GACCGGCGCG GCCGGCCCGA AGGCCATATC GTCGAGGTCA CCGACCGCGC TAACAAGCGC
GTGATCGGGC GTCTGTTGAA TGAGAACGGC GCGCTGATCG TCGTGCCCGA AGAGAAGCGC
ATCGGCCACG ACATCCTGAT CACGCAGAAC ACGAAGAAGG CGAAGGTGGG GCAGGTGGTC
GTCGTCGAAC TGACGGACTT TCCGAGCCGC CATTCGCAGC CGCTCGGACG CGTCATCGAA
GTACTGGGCG ACATCGACGA CCCCGGCATG GAGATCGAAA TCGCGGTGCG CAAGTACGGC
GTGCCGCACG AGTTCAGCCA GGCCGCGCTC GACGCCGCCG CGAAGCTGCC CGACGAAGTG
CGGCCCGTCG ACATCAAGCA TCGCGTCGAT CTGCGCGACG TGCCGCTCGT CACGATCGAC
GGCGAGGACG CACGCGATTT CGACGATGCG GTGTACTGCG AGCCCATCAA GGTCGGGCGT
GGCGACGGCT TCCGCCTGAT TGTCGCAATC GCCGACGTGT CACATTACGT GCTGCCCGAC
GGCGGCCTGG ATGTCGACGC GATCGAGCGC AGCACGTCGG TATACTTCCC GCGCCGCGTG
ATTCCGATGC TGCCGGAAAA GCTGTCGAAC GGTCTTTGCT CGCTGAACCC GCAAGTGGAT
CGCTGCGTGC TGGTCTGCGA CATGGTCATC ACCGCGCGCG GTGAGATCAA GGCGTATCAG
TTCTATCCGG GCGTGATGCA CTCGGCCGCG CGTCTCACGT ACACGGAAGT CGCGGCCGTG
CTGACCAACA CGAAGGGGCC GGAAGCGACG CGCCGCGCGG CGTTGCTGCC GCAACTGCAA
AATCTGTACG GCGTCTATAA GTCGTTGTTT GCCGCCCGTC AGAAGCGTGG CGCGATCGAC
TTCGATACGA CGGAGACGTA CATCGTCTGC AACGCGCAGG GCAAGATCGA GCAGATCGTG
CCGCGTCACC GCAACGACGC GCACAAGCTG ATCGAGGAAT GCATGCTGGC CGCGAACGTC
TGCGCGGCCG ACTTCATGAA GCGCAACAAG CATCCGGGTC TGTACCGCGT GCACGCCGGA
CCGACGGCCG AGCGCCTCGA GAATCTGCGC ACGTTCCTGC GTGGAATGGG CCTCACGCTT
GGCGGCGGCG ACACGCCGCA TGCCAGCGAT TACGCCGCGC TGATGGCGCA CATCCGCGAC
CGTCCCGACG CGCAGATGCT CCAGACGATG TTGCTGCGCT CGATGCAGCA GGCCGTCTAC
AGTCCGGAGA ACATTGGTCA CTTCGGTCTC GCGTATGAGG CGTACGCGCA CTTCACGAGC
CCGATCCGCC GCTATCCCGA CCTGCTCACG CACCGCGCGA TCTACGCGAT TTTGCAAGGC
CGCAAGTACG AGCCGAAGGC GCCGCATGGC GTCGAGCTGA ACACGGCGCT GTCGCCGCGC
GCGCGCGCGC TGCAGGCGGA AGACGAGAAG CGGGGCAACC GCGGCCGTCC AAACACGGCC
ATCTGGGAAG AACTCGGCTT GCACTGCTCG GCGAACGAGC GCCGTGCGGA TGAGGCATCG
CGCGACGTCG AAGCCTGGCT CAAGTGCTAC TTCATGCGCG ACAAGCTCGG TGAAGAGTAC
GGCGGCATGG TGAGCGGCGT GACGTCGTTC GGCATCTTCG TGCAGCTCGA CGCGCTTTTT
ATCGAAGGGC TCGTGCACGT GACGGAACTC GGCTCCGACT ACTTCCAGTA CGACGAGATC
AAGAACGAAC TGCGCGGCGA GCGCACGGGC ATCCGTTACC GGTTGTCGGA CCGCGTGCGC
GTGCAGGTGA GCCGCGTCGA TCTCGATGCG CGCAAGATCG ACTTCCGCCT GGTGCGCGAC
ACGCCCGTGA AGTCGCAGGC GCATCGGGCG ACCACTGCGG ACAAAGCGAG CGATCTCGGC
GGCCCGCGTG TGCGTTCGAT CGAGCGTGCC GCGCAGGCCG AAGGCGGCCG TCGCAAGAAA
GCGCCTGCAC AGACCGCGGC CGTGAAGGAA GCGCGCGCGG CGCGCAAGGC GGCGGTGTCG
AAGAAGCGCG CGGCGTCGAA ATCGTCGGCA AAGCCGGCGC GCAAGAAGCG TTGA
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| Protein sequence | MSKYPYPIPS REEILGVLRT SETPLAANDI AEALSIKRQE REGFFKRLAA MERDGQIRLD
QRGHYQLTHP SNFVAGRVQG HRDGYGFLIR DDGQDDLFLP TGEMQKVMHN DRVLARIVGY
DRRGRPEGHI VEVTDRANKR VIGRLLNENG ALIVVPEEKR IGHDILITQN TKKAKVGQVV
VVELTDFPSR HSQPLGRVIE VLGDIDDPGM EIEIAVRKYG VPHEFSQAAL DAAAKLPDEV
RPVDIKHRVD LRDVPLVTID GEDARDFDDA VYCEPIKVGR GDGFRLIVAI ADVSHYVLPD
GGLDVDAIER STSVYFPRRV IPMLPEKLSN GLCSLNPQVD RCVLVCDMVI TARGEIKAYQ
FYPGVMHSAA RLTYTEVAAV LTNTKGPEAT RRAALLPQLQ NLYGVYKSLF AARQKRGAID
FDTTETYIVC NAQGKIEQIV PRHRNDAHKL IEECMLAANV CAADFMKRNK HPGLYRVHAG
PTAERLENLR TFLRGMGLTL GGGDTPHASD YAALMAHIRD RPDAQMLQTM LLRSMQQAVY
SPENIGHFGL AYEAYAHFTS PIRRYPDLLT HRAIYAILQG RKYEPKAPHG VELNTALSPR
ARALQAEDEK RGNRGRPNTA IWEELGLHCS ANERRADEAS RDVEAWLKCY FMRDKLGEEY
GGMVSGVTSF GIFVQLDALF IEGLVHVTEL GSDYFQYDEI KNELRGERTG IRYRLSDRVR
VQVSRVDLDA RKIDFRLVRD TPVKSQAHRA TTADKASDLG GPRVRSIERA AQAEGGRRKK
APAQTAAVKE ARAARKAAVS KKRAASKSSA KPARKKR
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