Gene Bphy_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1647 
Symbol 
ID6243138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1866085 
End bp1867077 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID642593434 
ProductABC transporter related 
Protein accessionYP_001857875 
Protein GI186476405 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.480345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.121683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA GCACCTTGTC CGCCTCGTAT GGCGGCGTGG CGGGCGCCGA TCTCGAAGCC 
GAACTCCAGC AGCCGCGCAT GCACGATCGC GCCGCGGCGC AAGCGGCCAC CGCGGCCGTC
GAACGCGATG CCGTGTCGCT GCACGACTGG CTCGGGACGC CAGATGCGGG CGCTGCGCAG
CGTGAAATCA CCCGCGAGCC GCAAGACGTG TCGGTTGAAT TGCGCGGCGT CGGCAAGCGG
TACGGCGAGC GTGCCGTGCT CTCGGATGTC GATCTGTCGA TCGAGCGCGG CAGCTTCGTG
TCGATCGTTG GACGCAGCGG CTGCGGCAAG TCGACGCTGC TGCGGCTGAT TGCCGGCCTC
GAAGCGCCGA GCTCAGGCAA GCTGGAAAAA CGCGCGGACG GCTCGCAGCC GTTCGACACG
CGGATCATGT TTCAGGACGC GCGCCTGCTG CCGTGGAAGA GCGTGATGCA GAACGTGATG
CTGGGCCTTC GCCGGTCGTC GCGCGACGAT GCGCGCGCGG TGCTCGCCGA AGTCGGCCTG
CTGGAACGCG CGAACGACTG GCCCGCGCAG TTGTCGGGCG GTCAGCGGCA GCGCGTGGCG
CTGGCGCGCG CGCTCGTGCA CCGCCCGCAA CTGCTGCTGC TCGACGAACC GCTCGGCGCG
CTCGACGCGC TGACACGCAT CGAAATGCAT GCGTTGATTG AACGGCTGTG GCGCGAGCAT
CGCTTCACCG CGCTGCTCGT CACGCACGAC GTGCAGGAAG CCGTCGCGCT CGCCGATCGC
ATCCTGCTGA TCGAGGAGGG CAGGATCGCG CTCGATCAGC CCGTGCCCCT GGCGCGGCCT
CGCGAACGGG CGTCGACGTC TTTTGCAAAG CTCGAAGAAC ACGTGTTGCG GGGTGTGATG
AAGACACGGG CGCCGGACGA TCACGGGTTG CACGACGCGA ACGCGCATGA CGTGCGCAGC
GTGCACGCGC GCGACCTTCG CTGGGCAGTG TGA
 
Protein sequence
MSASTLSASY GGVAGADLEA ELQQPRMHDR AAAQAATAAV ERDAVSLHDW LGTPDAGAAQ 
REITREPQDV SVELRGVGKR YGERAVLSDV DLSIERGSFV SIVGRSGCGK STLLRLIAGL
EAPSSGKLEK RADGSQPFDT RIMFQDARLL PWKSVMQNVM LGLRRSSRDD ARAVLAEVGL
LERANDWPAQ LSGGQRQRVA LARALVHRPQ LLLLDEPLGA LDALTRIEMH ALIERLWREH
RFTALLVTHD VQEAVALADR ILLIEEGRIA LDQPVPLARP RERASTSFAK LEEHVLRGVM
KTRAPDDHGL HDANAHDVRS VHARDLRWAV