| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1641 |
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| Symbol | |
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| ID | 6244656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1862685 |
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| End bp | 1863686 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642593428 |
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| Product | YjbN family TIM-barrel protein |
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| Protein accession | YP_001857869 |
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| Protein GI | 186476399 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.406023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAA AGCCCAATGT CAGTGCCCGC CGCGTGTCCG TCGCGCCCAT GATGGACTGG
ACCGACCGCC ATTGCCGCTC GTTTCACCGC ACGCTGTCCC GGCACGCCTG GCTGTACACA
GAGATGGTGA CCACAGGGGC GCTGATTCAC GGGGACGTCG CGCGTCATCT TGCGTTTACG
GCTGATGAAG CGCCCGTCGC GTTGCAGCTC GGCGGCAGCG AGCGGGAAGA TCTGGCGAGG
TCGGCCAAGC TCGGCGAACA ATGGGGCTAC GACGAAATCA ATCTGAATTG CGGCTGCCCG
TCGGAGCGCG TGCAGCGCGG CGCATTCGGC GCATGCCTGA TGAAGGAGCC GGAACTCGTC
GCCGATTGCG TGAAGGCAAT GCGCGATGCG GTGTCGGTGC CCGTGACCGT CAAGCACCGG
ATCGGCGTCG ACGATGTCGA AGACTACGCG TTCGTGCGCG ACTTCGTCGG CACGATCGCC
GACGCAGGTT GTGACGTGTT CATCGTGCAC GCGCGCAACG CGATCCTCAA AGGCCTGAGC
CCGAAAGAGA ATCGCGAGAT CCCGCCGCTC AAGTACGACT ACGCGTATCG CCTGAAGCGC
GACTTTCCGC AGCTCGAAAT CATCATCAAT GGTGGCATCA AGACGCTGGA TGAAGTCGAA
ACGCACCTGC AGCACGTCGA CGGCGTGATG CTGGGCCGCG AGGCGTATCA CAACCCATTC
GTGCTCGCGG ATGTCGATGC GCGCTTCTAC GGTTCGACGG ATGCCGCGCC GACGCGCGAA
GAAGCCGAGG CGCAATTGAT CGAATATTGC CGCGCCGAGC TCGCGCGCGG TACCTACCTT
GGCGCGATCG TGCGCCATGC GCTGGGCCTG TATCGCGGCG TTGCGGGCGC GCGCGGATGG
CGGCGGGTGC TGTCCGATAA CAAGAAGCTG GCGGCACGCG ACCTCGCGAT TTTCGACGAA
GCGCGACAGC ATTTGCGCGA GCCCAGCGAA ATGTTTGAAT AA
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| Protein sequence | MSSKPNVSAR RVSVAPMMDW TDRHCRSFHR TLSRHAWLYT EMVTTGALIH GDVARHLAFT
ADEAPVALQL GGSEREDLAR SAKLGEQWGY DEINLNCGCP SERVQRGAFG ACLMKEPELV
ADCVKAMRDA VSVPVTVKHR IGVDDVEDYA FVRDFVGTIA DAGCDVFIVH ARNAILKGLS
PKENREIPPL KYDYAYRLKR DFPQLEIIIN GGIKTLDEVE THLQHVDGVM LGREAYHNPF
VLADVDARFY GSTDAAPTRE EAEAQLIEYC RAELARGTYL GAIVRHALGL YRGVAGARGW
RRVLSDNKKL AARDLAIFDE ARQHLREPSE MFE
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