Gene Bphy_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1630 
Symbol 
ID6243121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1853111 
End bp1853761 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID642593416 
ProductLexA repressor 
Protein accessionYP_001857858 
Protein GI186476388 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.5985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TTACCGCACG TCAGCAACAG GTTTTCGATC TGATCCGCCG CGCCATCGAG 
CGCACGGGCT TCCCGCCCAC GCGGGCCGAG ATCGCGGCCG AACTCGGCTT CAGTTCGGCC
AACTCGGCGG AAGAGCATCT GCGGGCGCTG GCGCGCAAAG GTGTCATCGA ACTGGCAGCG
GGCGCGTCGC GCGGCATCCG GCTCATCGCC GGTCAGGACG ACTTGCCGCA TCAGTTCACG
CTGCCGCACG CGAGCATCAT GCAGTTGTCG CTGCCGCTCG TCGGCCGTGT GGCCGCGGGC
AGTCCGATCC TCGCGCAAGA ACATATCTCG CAAACGTATA TGTGCGACCC GTCGCTGTTC
TCGAGCAAGC CCGACTACCT GTTGAAGGTG CGCGGCCTGT CGATGCGCGA CGCGGGCATC
TTCGACGGCG ACCTGCTCGC CGTGCAGAAA AAGAGCGAAG CGAAAGACGG CCAGATCATC
GTTGCGCGTC TGGGCGACGA CGTGACCGTG AAGCGTCTGA AGCGGCGGCC TGATGGGCTC
GAGCTGATCG CCGAGAACCC CGATTACGAG AATATTTTTG TTCAGGCCGG CAGTGCGGAG
TTCGCGCTCG AAGGCATCGC GGTCGGTCTG ATCCGGCCGT CGGAATTCTA A
 
Protein sequence
MTKLTARQQQ VFDLIRRAIE RTGFPPTRAE IAAELGFSSA NSAEEHLRAL ARKGVIELAA 
GASRGIRLIA GQDDLPHQFT LPHASIMQLS LPLVGRVAAG SPILAQEHIS QTYMCDPSLF
SSKPDYLLKV RGLSMRDAGI FDGDLLAVQK KSEAKDGQII VARLGDDVTV KRLKRRPDGL
ELIAENPDYE NIFVQAGSAE FALEGIAVGL IRPSEF