| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1601 |
|---|
| Symbol | |
|---|
| ID | 6243092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1818241 |
|---|
| End bp | 1820190 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642593387 |
|---|
| Product | thiamine pyrophosphate protein central region |
|---|
| Protein accession | YP_001857829 |
|---|
| Protein GI | 186476359 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3962] Acetolactate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.392192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC GCGCGTTGCA TCATGATGTG ACGACTCCAT CCGACACGAT CGCGCAGGTA
TGCGCCGATG GCACGATCCG TCTGACGGCG GCGCAGGCCG TCGTCCGTTA TCTCGCCGCA
CAGCTCGTCG AGACGGAAGA CGGCACGGGC ACCGAGCCGC TATTCGGCGG CGTGTTCGCG
ATCTTCGGGC ATGGCAATGT GGCGGGCCTC GGCGAAGCGC TCTATCAATA TCGTCACGAA
TTGCCGACTT ACCGTGCGCA CAACGAACAG GCGATGGCGC ACAGCGCGAT CGCCTTCGCC
AAGGCGCACT TCCGGCGGCG CATGATGGCG GTGACGACAT CGATCGGTCC GGGCGCAACC
AATCTCGTGA CGGCGGCGGC GCTCGCGCAT GTGAACCGCT TGCCCGTGCT GCTGCTGCCT
GGCGATATCT TTGTGTCGCG CGCGCCGGAC CCCGTGTTGC AGCAGGTGGA AGATTTCCAC
GACGGCGGCA TCTCGGCGAA CGACGCGTTC AAGCCCGTGT CGCGTTACTT CGATCGCATC
GTGCATCCCG CGCAATTGCT CAACGCGCTG CCGCGCGCGC TGCGCGTGCT GACGGACGCC
GCGCTGTGCG GCCCCGTCAC GCTCGCACTG CCGCAGGACG TGCAGGCCAC GGCCTACGAC
TACCCCGCGG ATTTCTTCGA ACCGCGCATC GTGAAGTTTC ATGCGCCCCC GCCCGTCGAG
CACGAACTCG ACGATGCGCT GCTCGTGCTG CGCAACGCGA AGCGGCCGAT GATCGTAGCA
GGTGGCGGCG TGCTCTACGG CCGCTCCACG GATGCACTGA AGACATTCGC GTCAAAGCAC
GGCATTCCCG TTGCGGAAAC GCAGGCGGGC AAGAGCGCGC TCGCGTGGGA CGACCCGCTG
AATCTCGGCT CGCTCGGCGT CACGGGCTCG CCGGGCGCCA ATGAGATCGC TCACGAAGCC
GATTGCGTGC TGGCCGTCGG CACGCGTCTG CAGGACTTCA CGACGGGTTC GAACACGCTC
TTCGCGCAGG CGCAGGTGAT CGGCATCAAT GCGAATGCGT TCGATGGTCT CAAGCATCGC
GGCTGTATCG TGCAAGCCGA TGCAAAGCTT GCACTCGAAG CCGTCGGCTC GCGGCTGGAA
GGCTGGCAAC CGGACAGCGC ATGGACCGCG CGCGCGCAAC AGCGTGCGAA CGAATGGCGC
GACATCGTGC ACAGGCTCAC GCACGCGCCT CAACACACGG CGGAAGGTCA AAGCGTGCTG
CCGTACGACG CCGACGTAAT CGGCGCCGTG CAGCGTTCCA GCGAACACTC GACCACCGAC
GACATCGTCG TCTGCGCGGC GGGCACGCTG CCCGCCGAAC TGCACAAGCT ATGGCGCGCA
GCACGTCCGG GCGCGTATCA CGTCGAGTAT GGCTATTCGT GCATGGGCTA CGAGATCGCA
GGCGGCTTGG GCGCCAAGCT CGCACGGCCC GAGCGAGAGG TGATCGTGAT GGTCGGCGAC
GGCAGCTATC TGATGATGAA CAGTGAGATC GCGACCTCCG TGATGCTCGG CGCGAAGCTG
ATCGTCGTCG TGCTCGACAA TCGCGGCTAT GGCTGCATCA ACCGCCTGCA GCAGGCATGC
GGCGGCGCGC CGTTCAACAA CATGTTCGAC GACTGCATGC AGGGCACACC CGGCGCTGCG
CATATCGACT TCGCCGCGCA CGCGCGCGCG ATGGGCGCGC AGGCCGAGCA TGTCGCGAAC
GTGCAGGAAC TCGAAGCCGC GATGCGGCGC GCGCGCGCCG CCGACCGCAC GTATCTGGTG
TGCATCGACA CCGACGCCGC GCGCACCACG GACCAAGGCG GCTGGTGGTG GGAAGTCGCC
GTGCCTGAAG TATCGCCGCG CGAAGGCGTG CGCCAGGCAC GCGCCGATTA CGAAGCGCAC
ACGAATGCGC GTGGCAGGAA CAACGAGTGA
|
|---|
| Protein sequence | MNQRALHHDV TTPSDTIAQV CADGTIRLTA AQAVVRYLAA QLVETEDGTG TEPLFGGVFA
IFGHGNVAGL GEALYQYRHE LPTYRAHNEQ AMAHSAIAFA KAHFRRRMMA VTTSIGPGAT
NLVTAAALAH VNRLPVLLLP GDIFVSRAPD PVLQQVEDFH DGGISANDAF KPVSRYFDRI
VHPAQLLNAL PRALRVLTDA ALCGPVTLAL PQDVQATAYD YPADFFEPRI VKFHAPPPVE
HELDDALLVL RNAKRPMIVA GGGVLYGRST DALKTFASKH GIPVAETQAG KSALAWDDPL
NLGSLGVTGS PGANEIAHEA DCVLAVGTRL QDFTTGSNTL FAQAQVIGIN ANAFDGLKHR
GCIVQADAKL ALEAVGSRLE GWQPDSAWTA RAQQRANEWR DIVHRLTHAP QHTAEGQSVL
PYDADVIGAV QRSSEHSTTD DIVVCAAGTL PAELHKLWRA ARPGAYHVEY GYSCMGYEIA
GGLGAKLARP EREVIVMVGD GSYLMMNSEI ATSVMLGAKL IVVVLDNRGY GCINRLQQAC
GGAPFNNMFD DCMQGTPGAA HIDFAAHARA MGAQAEHVAN VQELEAAMRR ARAADRTYLV
CIDTDAARTT DQGGWWWEVA VPEVSPREGV RQARADYEAH TNARGRNNE
|
|---|
| |