Gene Bphy_1588 details

Gene Information

• Locus tag: Bphy_1588
• Symbol: prpE
• ID: 6243079
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phymatum STM815
• Kingdom: Bacteria
• Replicon accession: NC_010622
• Strand: +
• Start bp: 1799620
• End bp: 1801620
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642593374
• Product: propionyl-CoA synthetase
• Protein accession: YP_001857816
• Protein GI: 186476346
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.74588
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 48
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGTCCT CTCGCGTAAG CGAAAAAAGA ACCACAGCAA AACCGCAGGA ACTGCAAAAA 
GCCGCACCCG TGAAAGGACA TCCTCCGATG ACCACCTACC GCGAGTTCCA CCGCCGGTCG 
ATCGAATCCC CGGAAGACTT CTGGCGCGAA CAGGCCAACC GGATCCATTG GGAAACCAGA 
TTCGAAACCG TTCTCGACCG CTCGAATCCG CCATTTTCAC GCTGGTTCGT CGGCGGCAGG 
ACGAATCTCT GCCATAACGC CGTCGACCGG CACCTCGCGG AACGCGCGCA GCAGAACGCG 
CTCATCTATG TGTCGACGGA AACGGGCATC GAGCGGCAAT ATACCTACGC CGAACTTCAC 
GCGGAAGTGA ACCGGATGGC AGCCGTGATG CGCTCGCTCG GCGTCAAGCG CAGCGACCGC 
GTGCTGATCT ACCTGCCCAT GATCCCCGAA GCCGTGTTCG CGATGCTCGC GTGCGCGCGG 
CTCGGCGCAA TTCACTCAGT CGTGTTCGGC GGCTTTGCCG CGCCGAACCT TGCCGCGCGC 
ATCGACGACG CGAAGCCCGT GCTGATCGTC ACCGCCGACG CGGGGGCGCG CGCAGGCAAA 
GTAATCGACT ACACACCGCT CGTCGATGAA GCGATGTCGC GCGCGACGCA CAAGACGCCG 
CACGTGCTGC TGATCGACCG GCAACTGACG CCCGAGCGTC TGAACGCGCC GTATCTCGTC 
GCGTACGAGC CACTGCGCGA GCAGTTCTTC GATGTCCACG TGCAATGCGA ATGGCTGGAA 
TCGACGGAAC CTTCGTATGT GCTCTATACG TCGGGCACGA CGGGCAAGCC GAAAGGCGTG 
CAGCGCGACG TCGGCGGCTA TGCCGTGGCG CTCGCGGCGT CGATGGAATA CATCTTCCAG 
GGCAAGCCGG CCGACACGAT GTTCACCGCC TCCGACGTCG GCTGGGTCGT CGGTCACAGC 
TACATCGTCT ACGCGCCGCT GATCGCCGGT CTCACGACAG TCATGTACGA GGGCACGCCG 
ATCCGTCCCG ACGGCGGTAT CTGGTGGCGG CTCGTCGAAC AGTACAAGAT CAATCTGATG 
TTTACCGCGC CGACAGCGAT CCGCGTGCTA AAGAAGCAGG ATCCCGCGCT GCTCAAACAG 
GCCGACTTGT CCAGCCTGCG TACGCTGTTT CTCGCCGGCG AGCCGCTCGA CGAACCGACA 
GCTTCATGGA TCGCCGACTC GCTCGGCAAA CCCGTCGTCG ACAACTTCTG GCAGACGGAA 
ACCGGCTGGC CGATTCTCGC AATCCAGCGC GGCGTCGAGG CGTTGCCGCA AAAACTCGGC 
TCTCCGGGCG TGCCCTGCTA CGGCTACGAT CTGACGCTGC GCAACGAGAA CACGGGCGAG 
CCGTGCCCGC CGGGCGAAAA AGGCGTGATC ACGCTCGGCT ATCCGTTGCC GCCGGGCTGT 
ATGTCGACCG TGTGGGGCGA TGATGCGCGC TTCGTGAAGA CCTATTGGGA AAGCGTGCCG 
AACCAGCAGG TCTATTCGAC TTTCGACTGG GGTATCCAGG ACGAAGACGG CTACGTGACG 
ATCCTCGGCC GCACCGACGA TGTGATCAAC GTCGCGGGCC ACCGGCTCGG CACGCGCGAA 
ATCGAGGAAG CGCTGTCGAG CCACAAGGCG GTGGCGGAAG TCGCCGTGGT CGGCGTGACG 
GATCAGGTCA AAGGACAGGC GGCGATTGCG TTCGTCGTCG TGCGCGATGC GGCTGCATAT 
GATTCGGACG ACGCGCGCGC GAAGCTCTCT GCCGACCTGT GCGCGACCGT CGATCGCCAG 
CTCGGCGCGA TCGCGCGGCC CGCGCAGGTG GCGCTGGTGT CGATGCTGCC CAAGACGCGC 
TCCGGCAAGC TGTTGCGCCG CGCGATCGCG GCGCTTGCCG AAGGACGCGA CCCCGGCGAC 
CTGCCGACCA TCGAAGATCC ATCCGCTTTG CAGCAGATTC GTGACGCCGT GGCACTCGGT 
TTCGGCACAC GCGGCGGCTG A 

 

Protein sequence

MLSSRVSEKR TTAKPQELQK AAPVKGHPPM TTYREFHRRS IESPEDFWRE QANRIHWETR 
FETVLDRSNP PFSRWFVGGR TNLCHNAVDR HLAERAQQNA LIYVSTETGI ERQYTYAELH 
AEVNRMAAVM RSLGVKRSDR VLIYLPMIPE AVFAMLACAR LGAIHSVVFG GFAAPNLAAR 
IDDAKPVLIV TADAGARAGK VIDYTPLVDE AMSRATHKTP HVLLIDRQLT PERLNAPYLV 
AYEPLREQFF DVHVQCEWLE STEPSYVLYT SGTTGKPKGV QRDVGGYAVA LAASMEYIFQ 
GKPADTMFTA SDVGWVVGHS YIVYAPLIAG LTTVMYEGTP IRPDGGIWWR LVEQYKINLM 
FTAPTAIRVL KKQDPALLKQ ADLSSLRTLF LAGEPLDEPT ASWIADSLGK PVVDNFWQTE 
TGWPILAIQR GVEALPQKLG SPGVPCYGYD LTLRNENTGE PCPPGEKGVI TLGYPLPPGC 
MSTVWGDDAR FVKTYWESVP NQQVYSTFDW GIQDEDGYVT ILGRTDDVIN VAGHRLGTRE 
IEEALSSHKA VAEVAVVGVT DQVKGQAAIA FVVVRDAAAY DSDDARAKLS ADLCATVDRQ 
LGAIARPAQV ALVSMLPKTR SGKLLRRAIA ALAEGRDPGD LPTIEDPSAL QQIRDAVALG 
FGTRGG