| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1581 |
|---|
| Symbol | |
|---|
| ID | 6243072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1789969 |
|---|
| End bp | 1790907 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642593367 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001857809 |
|---|
| Protein GI | 186476339 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.457037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGC TTCAGAACAT GCGCGTATTT GTCCGCGTCG TCGAAGCGGG CAGCTTTACG
GGCGCGGCGC AGCATCTCAA TACGACGACG GCTTATGCGT CGCGCGCCGT GTCCGATCTC
GAAGCGCATC TGCGCACGCG TCTCCTGAAC CGCACGACGC GCCGCATCGC GCTAACGGAA
GCGGGCGAGC GCTATCTGCA GCGCTGCGAG CAGATTCTTG CGTATGTCGA CCAGGCGGAA
GCCGAGGCCA GCGACGCGCA TGCGCGCCCG TCGGGCAAGC TGAAAGTTCA CGCGATGACG
AGCTTCGGCC AGCACTACGT GGTGCCCGCC GTGGGCCGAT ATCAGCAGCG TTATCCCGAT
GTCCATCTCG AACTGACGCT CGCGCAACGT ATGCCAGACC TGCTGGACGA AGGGTACGAC
GTCGCGCTCG TGCTCGCGCA GAGCCTGCCG GACTCCGGGC TGGTGTCGCA GCGTCTGGGC
AGTGCGTTCA GCATCGCGTG CGCTTCGCCC GATTATCTGG AGCGCAATGG CGTGCCGCAG
ACGCTGTCCG ATCTGCGCGG CCACACGTGT CTGCAGATGA TCACGCCCGT GATGCCCGCC
GACGAGTGGA CCTTCGACGG CCCGAACGGC CAGGAAACGC TGCATCTGGG TGCGTCGACG
TTCCAGATCA ACGTCGCCGA GGCGATGGCT GTGGCAGTGC GCGAAGGCAT GGGGGTCGCC
GTGCTGCCTA TCTATTCCGC GATTGCCGGT CTGCGTAGCG GCGAACTCGT GTGGATTCTG
CCGGAGTACA TCTCGCAGGA GATGAACGTC TACGCGCTGT ATCCGTCGCG GCAGTATCTG
GATGCGAAGA TCCGCACGTG GGTCGAGTTC CTGCGCGACG AACTTCCCGC GACGCTCGCC
ACCGACCAGG CCGAACTGCG CCAGTTCGCG CGGACTTGA
|
|---|
| Protein sequence | MDTLQNMRVF VRVVEAGSFT GAAQHLNTTT AYASRAVSDL EAHLRTRLLN RTTRRIALTE
AGERYLQRCE QILAYVDQAE AEASDAHARP SGKLKVHAMT SFGQHYVVPA VGRYQQRYPD
VHLELTLAQR MPDLLDEGYD VALVLAQSLP DSGLVSQRLG SAFSIACASP DYLERNGVPQ
TLSDLRGHTC LQMITPVMPA DEWTFDGPNG QETLHLGAST FQINVAEAMA VAVREGMGVA
VLPIYSAIAG LRSGELVWIL PEYISQEMNV YALYPSRQYL DAKIRTWVEF LRDELPATLA
TDQAELRQFA RT
|
|---|
| |