Gene Bphy_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1575 
Symbol 
ID6243066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1784661 
End bp1785980 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content64% 
IMG OID642593361 
Productribonuclease BN 
Protein accessionYP_001857803 
Protein GI186476333 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGTCCA GGTTGCGTCT CGATCTCGAC ACGCTCAAGC GGCTCGCGGA GTTCGCCGCG 
AAGCGCAGCG GCGAGGATCG CATTCCGCAG GTGGCGGGCA GTCTCACGTT CACGACGATG
CTGTCGCTGG TGCCGCTCGC GACAGTCGCG TTCGCGCTCT TTACCGCGTT TCCGATCTTT
GCCCAGTTCC AGGTGTCGCT GCAGACTTTT CTCGCCGAGC ATCTGATGCC CGACCAGGTC
AGCAGCCAGA TCTTCCGATA TCTGAACCAG TTCGCATCGA AGGCGAAGGG GCTGACCACG
CTCGGCATGA TCATTCTGTT CGTCACGTCG GTCATGACGA TGATGACAGT CGAATCGGCG
TTCAACGTGA TCTGGCGGGT GCGCAAGGCG CGGCCTTTCG CGCAGCGCGT GCTGGCCTAC
TGGGCGATCC TGACGCTCGG TCCTATCCTG ATCGGCGTTA GTCTGTCGAT CTCTTCCTAC
CTGTTCACGC AGTCGATGAC CTACACGGCC GCGCAGCGCA TCACGCCGCT GATCGAATGG
GCGCTCGCGG GCGCGACGCT GCCGTTGACG GTGCTCGCGT TCACGATGCT CTATGTGTTT
CTGCCGAACT GCCGGGTGGA ATGGCGCGAC GCCATCGTCG GCGGCGTGAC GGCCGCGATC
GCGTTCGAAC TGGCCAAGCG CGGCTTCGGC TTTTATATCC GGCGCATTCC GACGTATACG
GCCGTGTACG GCGCGTTCGC CGTGGTGCCG CTCTTCCTGC TGTGGATGTA CCTGAGCTGG
TTCATCACGC TGGCAGGCGC GATGATCGCG TCGGCGCTGC CCGCTATCCG CACGGGCCAA
TTCCACCGTC CGGACTTTCC GGGCAGCGAT CTGCTCGACT CGCTCGAACT GCTCGCACGC
CTCGTCGAAG CGCGCGAAGC GGGCACGCAT GGCTACACGG TGCCGGAACT CGCCCGCGCG
TTGCGCCGCG ATATGGAAAC GACGGTGCGC CTGTTGCAGC AGCTTGAAGG GATCGACTGG
ATCGTGCAGC TCGACGAAAA CGGCCACCGT CCGCGTTTTC TGCTGGTCGC GAACCCGAAC
CAGATCACCG TCGAGCGGCT CTTCGATCTG TTCGTTGTCG ACCGGGCGGA ACTGGCGTAT
CAGCTGAATC TGGACTCGAC GCGCGTGGAT AGCGCGACAT TGCTTGGCGC GCTCGATAAC
GAAGGTCTCA AAGTGAGCCT TGCGAACCTG CTGGCGGCGC GTGCCGTTGC GCGTGGCGCC
GCGCAGCAGA GCCCCGGAGG CATGGACGGG GCGGCGGCCT TGCCGCGCCA GACGGCATGA
 
Protein sequence
MLSRLRLDLD TLKRLAEFAA KRSGEDRIPQ VAGSLTFTTM LSLVPLATVA FALFTAFPIF 
AQFQVSLQTF LAEHLMPDQV SSQIFRYLNQ FASKAKGLTT LGMIILFVTS VMTMMTVESA
FNVIWRVRKA RPFAQRVLAY WAILTLGPIL IGVSLSISSY LFTQSMTYTA AQRITPLIEW
ALAGATLPLT VLAFTMLYVF LPNCRVEWRD AIVGGVTAAI AFELAKRGFG FYIRRIPTYT
AVYGAFAVVP LFLLWMYLSW FITLAGAMIA SALPAIRTGQ FHRPDFPGSD LLDSLELLAR
LVEAREAGTH GYTVPELARA LRRDMETTVR LLQQLEGIDW IVQLDENGHR PRFLLVANPN
QITVERLFDL FVVDRAELAY QLNLDSTRVD SATLLGALDN EGLKVSLANL LAARAVARGA
AQQSPGGMDG AAALPRQTA