| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1569 |
|---|
| Symbol | |
|---|
| ID | 6243060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1777762 |
|---|
| End bp | 1778862 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642593355 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_001857797 |
|---|
| Protein GI | 186476327 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.453683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCA ATACCCTCGG TACGCTCTTC ACCGTCACGA CCTTCGGCGA ATCGCACGGC
CCGGCTATCG GCTGTGTAAT CGACGGCTGC CCACCGGGTA TGTCGCTCGC CGAAGCCGAC
ATCCAGCTTG AACTCGACCG CCGCAAGCCG GGCACGTCGC GCCATGTGAC GCAGCGCCAG
GAAGAAGACA AGGTCGAGAT TCTCTCCGGC GTCTTCGAGG GCAAGACGAC GGGCGCGCCG
ATTGCACTGC TGATCCGCAA TACGGACCAG CGCAGCAAGG ACTACGGCAA TATCGCCGAC
ACGTTCCGCC CCGGCCACGC CGACTACACC TACTGGCAGA AATTCGGCAT ACGCGACTAT
CGCGGCGGCG GCCGTTCGTC CGCGCGCCTG ACGGCGCCGA CGGTGGCAGC GGGCGCAGTC
GCGAAGAAGT GGCTGCGCGA GAAGTTCGGC ACGGAGATTC GCGGCTACAT GGCGGCGCTC
GGCGAGATCG ACGTGCCGTT CATCGACTGG CAGTTCGTGC GCGAGAACCC GTTCTTCGTG
CCGAACGCGG ATGTCGTGCC GCAACTCGAA GCGTACATGG ACGCGTTGCG CAAGGACGGC
GATTCGATCG GCGCGCGCAT CAACGTGGTT GCGTCGGGCG TGCCCGTCGG ACTTGGTGAG
CCGCTGTTCG ACCGCCTCGA CGCCGACATC GCGCATGCAA TGATGGGCAT CAACGCGGTG
AAGGGCGTCG AAATCGGCGC GGGATTCGCG AGCGTGGCGC AGCGCGGCTC CGTGCATGGT
GACGAGCTGA CGCCGGAAGG CTTCGTCGGC AATCACGCGG GCGGCGTGCT CGGCGGTATT
TCGACGGGGC AGGACATCAC GGTCTCGATC GCGATCAAGC CGACGTCGAG CATCCGCACG
CCGCGCCGCT CGATCGACAA GAACGGGCAG CCCGCCGTCG TCGAAACGTT CGGCCGCCAC
GACCCCTGTG TCGGCATTCG TGCCACGCCG ATCGCCGAAG CCATGCTCGC CCTCGTGCTG
ATCGACCATG CGTTGCGGCA CCGCGCGCAA TGCGGCGACG TGGTGGTCGG TACGCCGAAG
ATCGCCGCCA GCGCGCCGTA A
|
|---|
| Protein sequence | MSGNTLGTLF TVTTFGESHG PAIGCVIDGC PPGMSLAEAD IQLELDRRKP GTSRHVTQRQ
EEDKVEILSG VFEGKTTGAP IALLIRNTDQ RSKDYGNIAD TFRPGHADYT YWQKFGIRDY
RGGGRSSARL TAPTVAAGAV AKKWLREKFG TEIRGYMAAL GEIDVPFIDW QFVRENPFFV
PNADVVPQLE AYMDALRKDG DSIGARINVV ASGVPVGLGE PLFDRLDADI AHAMMGINAV
KGVEIGAGFA SVAQRGSVHG DELTPEGFVG NHAGGVLGGI STGQDITVSI AIKPTSSIRT
PRRSIDKNGQ PAVVETFGRH DPCVGIRATP IAEAMLALVL IDHALRHRAQ CGDVVVGTPK
IAASAP
|
|---|
| |