| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1566 |
|---|
| Symbol | |
|---|
| ID | 6243057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1773552 |
|---|
| End bp | 1774328 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642593352 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001857794 |
|---|
| Protein GI | 186476324 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGTT CGATCAATCT GGAAGGCAAG GTGGCGCTGG TTACGGGCGC GTCGAGTGGA
CTGGGCAAGC GGTTTGCGAT GGTGTTGTCG CAGGCTGGCG CAAAGGTCGT GCTGGCAAGC
CGACGTATCG AACGCCTGAA GGAATTGCGC GCTGAGATCG AAGCGTCGGG CGGCGCTGCG
GCTGTCGTTT CTCTCGACGT GACCGACTAT CAGAGCATCA AGTCCGCCGT TGCGCATGCC
GAAACGGAAG CGGGCACAAT CGACATTCTG GTCAACAATT CGGGTGTGTC GACGACGCAG
AAGCTGACGG ACGTGACGCC TGCCGATTTC GAATACGTGT TCGACACGAA CACACGCGGC
GCGTTTTTCG TCGCGCAGGA AGTGGCCAAG CGGATGATCA TGCGCGGCGG CGGAACGAAC
AAGCCGCCGT ACCGGATCAT CAACATCGCA TCGGTGGCGG GTTTGCGGGT GCTGCCGCAG
ATCGGGCTCT ATTCGATGAG CAAGGCGGCC GTCGTGCATA TGACGAAGGC GATGGCGCAG
GAGTGGGGCC GCCACGGCAT CAATGTGAAC GCGATCTGCC CCGGCTATAT CGATACCGAG
ATCAACCACC ATCACTGGTC GACCGAGCAA GGGCAGAAGC TGGTGTCGAT GTTGCCGAGG
CATCGTGTGG GCAAGCCGGA AGATCTCGAT GGGCTGTTGC TGCTGCTCTG CGCCGACGAA
TCGCAGTTCA TCAACGGTTC GGTGATTGCC GCCGACGACG GCTTCGGCCT GTCGTGA
|
|---|
| Protein sequence | MGRSINLEGK VALVTGASSG LGKRFAMVLS QAGAKVVLAS RRIERLKELR AEIEASGGAA
AVVSLDVTDY QSIKSAVAHA ETEAGTIDIL VNNSGVSTTQ KLTDVTPADF EYVFDTNTRG
AFFVAQEVAK RMIMRGGGTN KPPYRIINIA SVAGLRVLPQ IGLYSMSKAA VVHMTKAMAQ
EWGRHGINVN AICPGYIDTE INHHHWSTEQ GQKLVSMLPR HRVGKPEDLD GLLLLLCADE
SQFINGSVIA ADDGFGLS
|
|---|
| |