| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1563 |
|---|
| Symbol | |
|---|
| ID | 6243054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1771322 |
|---|
| End bp | 1772026 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642593349 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_001857791 |
|---|
| Protein GI | 186476321 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG TCTACGCAAG CGCGGCAGCC GCGCTCGAAG GCATCGTCAA GGACGGCCAG
ACGTTCGCCG TCGGCGGCTT TGGATTGTGC GGCATTCCCG AGGCGCTGAT CGCGGCCCTG
CGCGACTCGG GCGTCAAGGG CATCACCTGC ATCAGCAATA ACGCGGGTGT CGACGGCTTC
GGCCTCGGCC TGCTGCTGGA AACGCGCCAG ATCAGGAAGA TGATCTCGTC GTACGTCGGT
GAGAACAAGG AGTTCGAGCG TCAGTATCTG GCGGGCGAAC TCGAGCTGGA ATTCACGCCG
CAAGGCACGC TGGCCGAAAA GCTGCGCGCC GGCGGCTCGG GCATCCCGGC GTTCTTCACC
AACACCGGCT TCGGCACGGT CATCGCGGAA GGCAAGGAAA CGCGCCAGTT CGGCGAGAAC
CATTACGTGC TCGAGCATTC GCTGACGGCC GACGTCGCGC TCGTCAAGGC ATGGAAGGCC
GACAAGTCGG GCAACCTGAT CTATCGCCGC ACGGCGCGCA ACTTCAACCC GATGTGCGCG
ATGGCCGGCA AGATCACGGT CGCGGAAGTC GAAGAGATCG TCGAGACGGG CGAGCTCGAT
CCGGATGCGA TCCACACGCC GGGCATCTTC GTGCAGCGCC TCGTGCTGAA TGCCCACCCG
GAAAAACGCA TTGAACAACG CATCGTCCGC GCGAAAGGAG AGTAA
|
|---|
| Protein sequence | MNKVYASAAA ALEGIVKDGQ TFAVGGFGLC GIPEALIAAL RDSGVKGITC ISNNAGVDGF
GLGLLLETRQ IRKMISSYVG ENKEFERQYL AGELELEFTP QGTLAEKLRA GGSGIPAFFT
NTGFGTVIAE GKETRQFGEN HYVLEHSLTA DVALVKAWKA DKSGNLIYRR TARNFNPMCA
MAGKITVAEV EEIVETGELD PDAIHTPGIF VQRLVLNAHP EKRIEQRIVR AKGE
|
|---|
| |