| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1492 |
|---|
| Symbol | |
|---|
| ID | 6242983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1688790 |
|---|
| End bp | 1689272 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642593276 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_001857720 |
|---|
| Protein GI | 186476250 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.953223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGC GGCGCACACA GCCATCCCGC ATCGGTTTGA TTTCGGACAC GCATAATCTC
GTGCGGCCGG AAGCGCTCGC ATGGCTCGCG CGTTGCGACG CGATCATCCA CGCGGGCGAC
ATCTGCAATC GGGCGGTGCT CGATGCGCTT GAACCGATCG CGCCGCTGAC TGTCGTGTGC
GGCAACAACG ACATGGGCGA CTGGGCCGCG TCCATTCCGC TGCACGCGAC GCTCGACGTG
CAGCAGGTCA GGATATTTGT CGTTCACGAT ATCGCCGATG TGCCGCGCGA TCTGCACGAC
GCAGGCGTGC GCGTGGTCGT GACGGGACAT TCGCACAAGC CGCTGATCGT CGAGCGCGAC
GGAGTGCTAT TCGTCAATCC CGGCAGCGCG GGACCGCGCC GTTTCAAGCT GCCGGTTTCG
GTGGGCATGT TGACGATCGA CGGTGCAAGC GTCGAAGCCA CGTTGCATAC GCTGACGCCA
TAA
|
|---|
| Protein sequence | MVKRRTQPSR IGLISDTHNL VRPEALAWLA RCDAIIHAGD ICNRAVLDAL EPIAPLTVVC
GNNDMGDWAA SIPLHATLDV QQVRIFVVHD IADVPRDLHD AGVRVVVTGH SHKPLIVERD
GVLFVNPGSA GPRRFKLPVS VGMLTIDGAS VEATLHTLTP
|
|---|
| |