| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1477 |
|---|
| Symbol | |
|---|
| ID | 6242968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1666382 |
|---|
| End bp | 1667671 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593260 |
|---|
| Product | cytosine deaminase |
|---|
| Protein accession | YP_001857705 |
|---|
| Protein GI | 186476235 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.613678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA TCATCCGTCG TGCCGCATTG CCGCGCAGCG CCTCGCAACA GCGTGGCCTC
GTCGACATTG GCATCGAGGC AGGCCGCATC GTCGCGGTCG AGCCGAAGCT CGCGGCAACT
GCGCGTGAGG AAATCGATGC CGACGGTGGG CTCGTCACGC CGCCTTTCGT CGATGCGCAT
TTCCACATGG ACGCGACGCT GTCATATGGT CTGCCGCGTG TGAACGCGTC GGGCACCTTA
CTCGAAGGCA TCGCGCTATG GGGCGAACTG AAGCCGCATC TGACGCAGGA GGCGCTGGTC
GAGCGTGCGC TGCAATATTG CGATTGGGCC GTCGCGCGCG GGTTGCTGGC CATCCGCACG
CATGTCGACG TGTGCGACGA GCGTCTCTTT GCCGTCGAAG CGCTGCTTGA GGTGAAGCGC
CGCGTCGCGC CTTATCTGGT TCTGCAACTG GTTGCGTTTC CGCAAGACGG CCTGCTGCGC
AGCGCCGGCG CGTTCGACAA CCTCAAGCGC GCGATCGCGA TGGGCGTCGA CGTGGTCGGT
GGCATCCCGC ATTTCGAACG AACGATGGCG GACGGCGCCG AGTCGGTGCG GCTGCTCTGC
GAGTTCGCCG CGCAGAAGGG CTTGCGCGTC GACATGCATT GCGACGAATC CGACGATCCG
ATGTCGCGTC ACATCGAAAC GCTCGCCGCG CAAGCCCATC GGCTAGGCCT GCACGGACGC
GTGACGGGTT CGCATCTGAC GTCGATGCAT TCGATGGACA ACTACTACGT CAGCAAGCTG
CTGCCGTTGA TGCGCGAATC GGGCGTAGCG GCCATTGCGA ACCCGCTCAT CAACATCACG
TTGCAGGGGC GCTCGGACAC CTATCCGAAG CGGCGCGGTA TGACGCGCGT GCCCGAGATG
CTGGAGGCGG GAATCAATGT TGCGTTCGGC CACGACTGCG TGATGGACCC GTGGTACAGC
CTCGGCTCAG GCGACATGCT GGAAGTCGCG CATATGGGGT TGCACGTCGC GCAGATGACG
GGCATCGACG CGATGCACAC GTGCTTCGAT GCCGTCACGG TGAACGCGGC GCGTATCCTG
GGGTTGGAGC GTTATGGAAT TGAGCCGGGA TCCGACGCGA ATCTTGTCTT GCTCGACGCA
CGCGACGCCG TCGAAGCGAT ACGCCTGCGC GCGGCGAGGC GCGCGGTGGT GAGTCGAGGG
AAAGTCGTTA GCCGTGCGCC GGCAGCACGC GCGTCGTTAT CGCTGGAAGG GCGGCCAACG
GAAGTGGACT TCAAGCTGCA TCGCGAATGA
|
|---|
| Protein sequence | MDLIIRRAAL PRSASQQRGL VDIGIEAGRI VAVEPKLAAT AREEIDADGG LVTPPFVDAH
FHMDATLSYG LPRVNASGTL LEGIALWGEL KPHLTQEALV ERALQYCDWA VARGLLAIRT
HVDVCDERLF AVEALLEVKR RVAPYLVLQL VAFPQDGLLR SAGAFDNLKR AIAMGVDVVG
GIPHFERTMA DGAESVRLLC EFAAQKGLRV DMHCDESDDP MSRHIETLAA QAHRLGLHGR
VTGSHLTSMH SMDNYYVSKL LPLMRESGVA AIANPLINIT LQGRSDTYPK RRGMTRVPEM
LEAGINVAFG HDCVMDPWYS LGSGDMLEVA HMGLHVAQMT GIDAMHTCFD AVTVNAARIL
GLERYGIEPG SDANLVLLDA RDAVEAIRLR AARRAVVSRG KVVSRAPAAR ASLSLEGRPT
EVDFKLHRE
|
|---|
| |