Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1415 |
Symbol | hfq |
ID | 6242906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 1594537 |
End bp | 1594773 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642593198 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001857643 |
Protein GI | 186476173 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000152957 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG TAAAGAGCAC GTGCCGGTCT CGATCTATCT GGTCAACGGC ATCAAGCTTC AAGGGAACAT TGAATCGTTC GACCAGTACG TCGTGTTGCT CCGGAATACG GTAACCCAGA TGGTCTACAA GCACGCTATC TCGACTGTCG TGCCTGCCCG TCCGGTGAAT TTCCACCCGG ATTCCGAATC GTCCTAA
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Protein sequence | MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI STVVPARPVN FHPDSESS
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