Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1413 |
Symbol | |
ID | 6242904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 1591806 |
End bp | 1593203 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642593196 |
Product | HflK protein |
Protein accession | YP_001857641 |
Protein GI | 186476171 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.843638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000076277 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACGATT ACAACGAGCG GAGTATCTGG CTGCGTGTGC GCGCCATGTT GTCGCTGAAC GACCCCCGCT GGGGCCGGGG TGAAGGCAAT GGCGACCGCC AGCGTCTGAA CGATTCGAAG CGTCCGCCCA ACGGCAAGGA CAGCGAAGGT CCGCCCGATC TCGACGAAAT GTGGCGCGAC TTCAATCGAC GTCTGTCGCG CATGTTCGGC CGCAAGGGCG GGGGCGGCGG TCCGCGTCCG GACAATGGGC GCGGCGCACG CATCGGCGTG GGCATCATCA TCGGCGTGCT GGTCGCCATT TATCTTGGCA GCGGCGTGTT CGTCGTGCAG GACGGCCAGG CGGCCGCGGT GCTGCGCTTC GGCGAGTTGC GCGGCACGGC CGGCCAGGGC GTGCATTGGC GCATGCCTTA TCCGTTCGAA TCCCATGAAA TCGTCAACGT CGGCCAGGTG CGCTCAGTGG AAATCGGCCG CAACAACGTC GTGCGCCTCG CGAACGTGAA AGACGCGTCG ATGCTCACGC ACGACGCCGA TATCGTCGAC GTCCGTTTTG CTGTCCAGTA CCAGATCCGC AAGCCGACCG ATTACCTGTT CCGTAGCGCC GATGCCGATC TGAGCGTCAC CCAGGCGGCA CAGGCGGCTG TGCGGCAGAT CGTCGGTTCG CGCAGTACCA ACGACATCCT GTATCGGGAT CGCGAGGCGA TTCGCATTCA ATTGTCGGAA GCGATCCAGC ATTCGTTGGA CGAATATCAC ACGGGTCTCG CCGTGACGGG CGTGACGATC CAGGGCGTGC AACCGCCCGA CCAGGTGCAG GCCGCCTTCG ACGACGCTAC GAAGGCACGT CAGGACCGTG AGCGTACCAG GCGCGATGCC GAAGCCTATG CAAGCGACCT GCTGCCGCGC GCGAAAGCGG AAGGCGAGCG AATGATCGCG GACGCGAAGA CGTACAGCGA GCGCGTCGTT GCGCAAGCGG AAGGCGACGC CGAGCGCTTC AAGGAGGTCT TTGCGCAGTA TTCGAAGGCG CCTGCCGTGA TCCGCGACCG GATGTACCTC GAAACCATGC AGCAGATCTT TTCGAACACG ACGAAGGTAT TCGTCGATAG CAAGTCGGGC AGCAATGTGC TGTACCTGCC GCTGGACAAG CTCGTCGAGC AGACACGCCA GCGCGCGGCC GAGGCCGCAG CGGCGAATCC GGCGTCGGCA GCGCAGGCTG TGCCTTCCCC GCAGAACCAG CCAAACGCAC CAAGCGCGCA GGGCGCAGCG CAAGGCGGCA ATGCGCCGAC CATCATCACG CAGCCTGCCG CACCCGTCAG CAGCGCAAGT CAGGCGGCAG CCGCGAGCGA CGCCTTCCGT TCGCGCGATT CGTTCCGCAG TCGCGGCCGC GAAGACGATC TGCAATAA
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Protein sequence | MNDYNERSIW LRVRAMLSLN DPRWGRGEGN GDRQRLNDSK RPPNGKDSEG PPDLDEMWRD FNRRLSRMFG RKGGGGGPRP DNGRGARIGV GIIIGVLVAI YLGSGVFVVQ DGQAAAVLRF GELRGTAGQG VHWRMPYPFE SHEIVNVGQV RSVEIGRNNV VRLANVKDAS MLTHDADIVD VRFAVQYQIR KPTDYLFRSA DADLSVTQAA QAAVRQIVGS RSTNDILYRD REAIRIQLSE AIQHSLDEYH TGLAVTGVTI QGVQPPDQVQ AAFDDATKAR QDRERTRRDA EAYASDLLPR AKAEGERMIA DAKTYSERVV AQAEGDAERF KEVFAQYSKA PAVIRDRMYL ETMQQIFSNT TKVFVDSKSG SNVLYLPLDK LVEQTRQRAA EAAAANPASA AQAVPSPQNQ PNAPSAQGAA QGGNAPTIIT QPAAPVSSAS QAAAASDAFR SRDSFRSRGR EDDLQ
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