| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1409 |
|---|
| Symbol | |
|---|
| ID | 6242900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1587671 |
|---|
| End bp | 1589017 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642593192 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_001857637 |
|---|
| Protein GI | 186476167 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00000087591 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCA GCGCAGTGAA TGTGAACCCT GGGCGCAATG TCGTCGTCGT GGGTACCCAG
TGGGGTGATG AGGGCAAAGG CAAGATCGTT GACTGGCTCA CGGACCACGC GCAAGGCGTC
GTTCGTTTCC AGGGCGGTCA TAACGCCGGT CATACGCTCA TCATCGGCGG CAAGAAAACC
ATCTTGCGTC TGATTCCGTC GGGCATCATG CGCCCGGGCG TCGCCTGCTA CATCGGCAAT
GGCGTCGTGT TGTCTCCGGA AGCGCTATTC AAGGAAATCG AAGAGCTGGA ATCGGCCGGC
ATCGACGTGC AAAAGCGTCT CTTCATTTCC GAAGCCACCA CGCTGATTCT CCCGTACCAC
GTTGCCATCG ACCAGGCGCG CGAAGCACGC AGCGGCGCCG GCAAGATCGG CACGACGGGA
CGCGGCATCG GCCCGGCCTA CGAGGACAAG GTCGCGCGCC GCGGTTTGCG CGTGCAGGAC
CTGTTCGAGC CGAAGGCTTT CGCCGAACGT CTGCGTGCGA ACCTCGATTT CCACAACTTC
GTGCTCACGC AATATCTGGG TGCGCCGGCT GTCGACTATC AGCAGACGCT CGACATGATG
CTGAGCTATG CCGACCGTCT GAAGCCGATG GTGACGGATG TGTCACGCCG TCTCTATGAC
GAGAACCACG TGGGCAACAA CCTGCTGTTC GAAGGCGCGC AAGGCACGCT GCTCGATATC
GATCACGGCA CGTATCCGTT CGTGACGTCG AGCAATTGCG TCGCGGGTGC GGCGACGGCG
GGCGCGGGCA TCGGCCCGCA AAAGCTGGAC TACATCCTCG GTATCACAAA GGCGTACTGC
ACGCGTGTCG GTTCGGGTCC GTTCCCGAGC GAACTGTATG ACGCGGACAA CGCGAACCGG
CAGGAAGAGG TCGGCCTGAC GCTCGCGAAG GTCGGCAAGG AATTCGGCTC GGTCACGGGT
CGTCCACGCC GCACCGGCTG GCTCGACGCT GCCGCGCTGC GCCGTGCGAT CCAGATCAAC
GGCGTATCGG GTCTTTGCAT CACGAAGCTC GACGTGCTCG ACGGCCTCGA CGAAGTGAAG
CTGTGCGTCG GGTATACGAT CGATGGCAAG GACGCCGACA TCCTGCCGCG CGGCGCGTAT
GAAGTGTCGC GCTGCGAGCC GGTGTACGAA ACCTTTGGTG GCTGGAAGGA AAGCACCGTC
GGCATCAAGG AGTGGAACAA GCTGCCCGCC AACGCTCAGG CGTATCTGAC GCGCGTGCAG
GAAGTGGCGG GCGTGCCCAT CGACATGGTT TCGACGGGTC CGGACCGCGA CGAGACCATT
CTTCTGCGTC ACCCGTTCAA GGTTTAA
|
|---|
| Protein sequence | MSASAVNVNP GRNVVVVGTQ WGDEGKGKIV DWLTDHAQGV VRFQGGHNAG HTLIIGGKKT
ILRLIPSGIM RPGVACYIGN GVVLSPEALF KEIEELESAG IDVQKRLFIS EATTLILPYH
VAIDQAREAR SGAGKIGTTG RGIGPAYEDK VARRGLRVQD LFEPKAFAER LRANLDFHNF
VLTQYLGAPA VDYQQTLDMM LSYADRLKPM VTDVSRRLYD ENHVGNNLLF EGAQGTLLDI
DHGTYPFVTS SNCVAGAATA GAGIGPQKLD YILGITKAYC TRVGSGPFPS ELYDADNANR
QEEVGLTLAK VGKEFGSVTG RPRRTGWLDA AALRRAIQIN GVSGLCITKL DVLDGLDEVK
LCVGYTIDGK DADILPRGAY EVSRCEPVYE TFGGWKESTV GIKEWNKLPA NAQAYLTRVQ
EVAGVPIDMV STGPDRDETI LLRHPFKV
|
|---|
| |