Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1407 |
Symbol | |
ID | 6242898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 1584877 |
End bp | 1586763 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642593190 |
Product | K potassium transporter |
Protein accession | YP_001857635 |
Protein GI | 186476165 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.196511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000731332 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACAGATA ACCCTCACGT CCCCAAGCAG CCCTTGCCAT CGCTTGCAGT TGCTGCGATC GGCGTGGTCT TCGGGGATAT CGGCACAAGC CCGCTGTACT CGCTGAAAGA AGCCTTCAGC CCATCCCACG GTATTCCTCT CACCGAAAGC TCCATTCTCG GCGTGATTTC GCTGATGTTC TGGGCGATCG TCGTCGTTGT CAGCATCAAG TACGTGATGT TCGTGATGCG CGCCGACAAT AACGGCGAGG GCGGGGTGCT CGCGCTGATG GCGCTGTCGC TGCGCTCCTT CGACACGAAG AGCAAGGCAG CGGGCCTGCT GATGATGCTC GGCATCTTCG GCGCCTGCAT GTTCTACGGC GACGCGGTGA TCACGCCGGC CATTTCGGTG ATGTCCGCGG TCGAAGGTCT GGAGATTGCG GCCCCGAAGC TGTCGCATCT GGTGCTGCCG CTCACGATGG TGATTCTCGT GCTGCTGTTC TGGATCCAAC GCCACGGGAC GGCGATGGTC GGGCGGCTGT TCGGCCCGAT CATGGTGCTG TGGTTCGTGA CGCTCGCGGT GCTCGGCGTG TCGCATATCG TGCAATCGCC GGAAGTGATC AAGGCGCTCA ATCCGTACTA CGCGTTCTCA TTCATGTCGG CGCACGTGTT GCAGGCCTAC GTGGTGCTCG GTTCGGTCGT GCTCGTGCTG ACGGGCGCGG AAGCGCTCTA CGCCGACATG GGCCACTTCG GTGCGGCGCC CATCCGCTGC GCGTGGTACG CGCTCGTGAT GCCGTCGCTG GTACTGAACT ACTTCGGCCA GGGCGCGCTG CTGATGCACG ACCCGAAGGC GATCGAGAAC CCGTTCTTCC TGCTCGCACC CGACTGGGCT CTGCTGCCGC TCGTCGTGCT GTCGACGGTT GCGACCGTCA TCGCGTCGCA GGCGGTGATT TCGGGCGCGT ATTCGCTGAC CAGCCAGGCG ATCCAGCTCG GCTATGTGCC CCGCATGAAG ATCCTGCACA CGTCGGAACT TGCGATCGGG CAAATCTACG TGCCTGTCGT CAACTGGATG CTGCTGTTCA TCATCCTGTG CATCGTCATT GCGTTCAAGA GCTCGGATAA TCTGGCCGCG GCTTACGGTA TTGCGGTGAC GGCGACGATG GTGATCACGA CGATCCTCGC GAGCGTCGTG ATGGTGAAGG TGTGGAACTG GAACAAGGGC GTCGTGGCGC TGATCATCGC GGCCCTGATG ATCGTCGACC TGGGCTTCTT CGGCGCGAAT CTGCTGAAGG TGGCAGAGGG CGGCTGGCTG CCACTCGGCA TTGGTGCGCT GCTGTTCTTC CTGCTGATGA CGTGGTTCAA GGGGCGCATG ATCGTAAAGG AGCGCACGGC AGCCGACGGT ATCCCGCTGA TGCCTTTCGT GCAGGGATTG CTCGCACATC CGCCGCATCG CGTGTCGGGG ACGGCGATCT ATCTGACGGG CAGTGCGACG CTGGTGCCGG TGAGCTTGTT GCACAATCTC AAGCACAACA AGGTACTACA CGAGCGGACG ATCTTTCTGA CGTTCATCAC GCGGGATATT CCTTATGTCG ATGACAAGGA CCGGCTGACG GTGAAGGACG TGGGCGGCGG GCTGTTTCTC GTGAAGGCCG CGTATGGCTT TAACGAGACG CCTGACGTGA AGGCTGTTCT AGAACAGATC AGCGTGTCAC ATGACATGTC GTTCGAGTTG ATGGACACGT CATTCTTTCT GGCGCGCGAG ACTGTCGTGC CGACGCAGTT GCCCGGCATG TCGGTGTGGC GCGAACGCGT GTTCGCGTGG ATGCATCAGA ATGCGGCCAA GCCGACGGAT TTCTTTAGTA TTCCCGCGAA TCGGGTGGTC GAGTTGGGGA CCAAGATCGA GATCTGA
|
Protein sequence | MTDNPHVPKQ PLPSLAVAAI GVVFGDIGTS PLYSLKEAFS PSHGIPLTES SILGVISLMF WAIVVVVSIK YVMFVMRADN NGEGGVLALM ALSLRSFDTK SKAAGLLMML GIFGACMFYG DAVITPAISV MSAVEGLEIA APKLSHLVLP LTMVILVLLF WIQRHGTAMV GRLFGPIMVL WFVTLAVLGV SHIVQSPEVI KALNPYYAFS FMSAHVLQAY VVLGSVVLVL TGAEALYADM GHFGAAPIRC AWYALVMPSL VLNYFGQGAL LMHDPKAIEN PFFLLAPDWA LLPLVVLSTV ATVIASQAVI SGAYSLTSQA IQLGYVPRMK ILHTSELAIG QIYVPVVNWM LLFIILCIVI AFKSSDNLAA AYGIAVTATM VITTILASVV MVKVWNWNKG VVALIIAALM IVDLGFFGAN LLKVAEGGWL PLGIGALLFF LLMTWFKGRM IVKERTAADG IPLMPFVQGL LAHPPHRVSG TAIYLTGSAT LVPVSLLHNL KHNKVLHERT IFLTFITRDI PYVDDKDRLT VKDVGGGLFL VKAAYGFNET PDVKAVLEQI SVSHDMSFEL MDTSFFLARE TVVPTQLPGM SVWRERVFAW MHQNAAKPTD FFSIPANRVV ELGTKIEI
|
| |