Gene Bphy_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1407 
Symbol 
ID6242898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1584877 
End bp1586763 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content61% 
IMG OID642593190 
ProductK potassium transporter 
Protein accessionYP_001857635 
Protein GI186476165 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.196511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000731332 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAGATA ACCCTCACGT CCCCAAGCAG CCCTTGCCAT CGCTTGCAGT TGCTGCGATC 
GGCGTGGTCT TCGGGGATAT CGGCACAAGC CCGCTGTACT CGCTGAAAGA AGCCTTCAGC
CCATCCCACG GTATTCCTCT CACCGAAAGC TCCATTCTCG GCGTGATTTC GCTGATGTTC
TGGGCGATCG TCGTCGTTGT CAGCATCAAG TACGTGATGT TCGTGATGCG CGCCGACAAT
AACGGCGAGG GCGGGGTGCT CGCGCTGATG GCGCTGTCGC TGCGCTCCTT CGACACGAAG
AGCAAGGCAG CGGGCCTGCT GATGATGCTC GGCATCTTCG GCGCCTGCAT GTTCTACGGC
GACGCGGTGA TCACGCCGGC CATTTCGGTG ATGTCCGCGG TCGAAGGTCT GGAGATTGCG
GCCCCGAAGC TGTCGCATCT GGTGCTGCCG CTCACGATGG TGATTCTCGT GCTGCTGTTC
TGGATCCAAC GCCACGGGAC GGCGATGGTC GGGCGGCTGT TCGGCCCGAT CATGGTGCTG
TGGTTCGTGA CGCTCGCGGT GCTCGGCGTG TCGCATATCG TGCAATCGCC GGAAGTGATC
AAGGCGCTCA ATCCGTACTA CGCGTTCTCA TTCATGTCGG CGCACGTGTT GCAGGCCTAC
GTGGTGCTCG GTTCGGTCGT GCTCGTGCTG ACGGGCGCGG AAGCGCTCTA CGCCGACATG
GGCCACTTCG GTGCGGCGCC CATCCGCTGC GCGTGGTACG CGCTCGTGAT GCCGTCGCTG
GTACTGAACT ACTTCGGCCA GGGCGCGCTG CTGATGCACG ACCCGAAGGC GATCGAGAAC
CCGTTCTTCC TGCTCGCACC CGACTGGGCT CTGCTGCCGC TCGTCGTGCT GTCGACGGTT
GCGACCGTCA TCGCGTCGCA GGCGGTGATT TCGGGCGCGT ATTCGCTGAC CAGCCAGGCG
ATCCAGCTCG GCTATGTGCC CCGCATGAAG ATCCTGCACA CGTCGGAACT TGCGATCGGG
CAAATCTACG TGCCTGTCGT CAACTGGATG CTGCTGTTCA TCATCCTGTG CATCGTCATT
GCGTTCAAGA GCTCGGATAA TCTGGCCGCG GCTTACGGTA TTGCGGTGAC GGCGACGATG
GTGATCACGA CGATCCTCGC GAGCGTCGTG ATGGTGAAGG TGTGGAACTG GAACAAGGGC
GTCGTGGCGC TGATCATCGC GGCCCTGATG ATCGTCGACC TGGGCTTCTT CGGCGCGAAT
CTGCTGAAGG TGGCAGAGGG CGGCTGGCTG CCACTCGGCA TTGGTGCGCT GCTGTTCTTC
CTGCTGATGA CGTGGTTCAA GGGGCGCATG ATCGTAAAGG AGCGCACGGC AGCCGACGGT
ATCCCGCTGA TGCCTTTCGT GCAGGGATTG CTCGCACATC CGCCGCATCG CGTGTCGGGG
ACGGCGATCT ATCTGACGGG CAGTGCGACG CTGGTGCCGG TGAGCTTGTT GCACAATCTC
AAGCACAACA AGGTACTACA CGAGCGGACG ATCTTTCTGA CGTTCATCAC GCGGGATATT
CCTTATGTCG ATGACAAGGA CCGGCTGACG GTGAAGGACG TGGGCGGCGG GCTGTTTCTC
GTGAAGGCCG CGTATGGCTT TAACGAGACG CCTGACGTGA AGGCTGTTCT AGAACAGATC
AGCGTGTCAC ATGACATGTC GTTCGAGTTG ATGGACACGT CATTCTTTCT GGCGCGCGAG
ACTGTCGTGC CGACGCAGTT GCCCGGCATG TCGGTGTGGC GCGAACGCGT GTTCGCGTGG
ATGCATCAGA ATGCGGCCAA GCCGACGGAT TTCTTTAGTA TTCCCGCGAA TCGGGTGGTC
GAGTTGGGGA CCAAGATCGA GATCTGA
 
Protein sequence
MTDNPHVPKQ PLPSLAVAAI GVVFGDIGTS PLYSLKEAFS PSHGIPLTES SILGVISLMF 
WAIVVVVSIK YVMFVMRADN NGEGGVLALM ALSLRSFDTK SKAAGLLMML GIFGACMFYG
DAVITPAISV MSAVEGLEIA APKLSHLVLP LTMVILVLLF WIQRHGTAMV GRLFGPIMVL
WFVTLAVLGV SHIVQSPEVI KALNPYYAFS FMSAHVLQAY VVLGSVVLVL TGAEALYADM
GHFGAAPIRC AWYALVMPSL VLNYFGQGAL LMHDPKAIEN PFFLLAPDWA LLPLVVLSTV
ATVIASQAVI SGAYSLTSQA IQLGYVPRMK ILHTSELAIG QIYVPVVNWM LLFIILCIVI
AFKSSDNLAA AYGIAVTATM VITTILASVV MVKVWNWNKG VVALIIAALM IVDLGFFGAN
LLKVAEGGWL PLGIGALLFF LLMTWFKGRM IVKERTAADG IPLMPFVQGL LAHPPHRVSG
TAIYLTGSAT LVPVSLLHNL KHNKVLHERT IFLTFITRDI PYVDDKDRLT VKDVGGGLFL
VKAAYGFNET PDVKAVLEQI SVSHDMSFEL MDTSFFLARE TVVPTQLPGM SVWRERVFAW
MHQNAAKPTD FFSIPANRVV ELGTKIEI