| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1403 |
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| Symbol | |
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| ID | 6242894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1578477 |
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| End bp | 1580750 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642593186 |
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| Product | helicase c2 |
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| Protein accession | YP_001857631 |
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| Protein GI | 186476161 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.127709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000000348035 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAACTCAC CGCTTCAATC TTCTTCCCGG ACGGCGTCGG ACGATGACGC ATCGGGTGCC
GCGTCGCCGG CTTCCGCCGA GCGTGCCACC AAAGGCGCGT TGGGCGGCGG CGCGCTGGCC
GCGTCACTGA CTCACAAGCG GTCGTCGGAA CTCGCCGACA TCTTCGCCGC TGATGGGCTG
CTCGCGCGTC AGATCGACGG CTACCGGCCG CGTGCCTCGC AGATCGAGAT GGCACGCGCC
GTCGCGGCCG CGATGGAAGC CTCGGGCCGC GCGATGCCCG AGCCCGCGAT GTTCGAAGCA
CAGAAGCGGC CGGCGCGGCG TTTGCAACAC ACGTCGTCGG CGTCGGCAAC GGATGCGCCG
GCGGACCAGG CATCGTCTCC GGAAGGCGCT CTGGAAGGCG GCGAAAACAC GCTGATCGTC
GAAGCCGGGA CGGGCACGGG CAAGACGTAT GCGTATCTCG TGCCCGCCAT GCTATGGGGC
GGCAAGGTCA TCGTCTCGAC GGGCACGAAG CACCTGCAGG ATCAGCTTTT TCTTCGCGAT
ATTCCGACTG TGCGCGACGC GCTTGCCGTC CCTGTGTCGG TTGCGATGCT CAAGGGCCGT
GCGAACTATT TGTGCCACTA CTACCTGCAA CGCACGGCGG ACAACGGCCG CTTGCCGTCG
CGGCAGGAGA CGTCGTATCT GCAGGACATC ATCCGCTTCG CGAAGATCAC GCGCACAGGT
GACAAGGCCG AGCTCGCGAG CGTGCCGGAG ACGGCTGCCG TGTGGTCGAT GGTGACATCG
ACGCGCGACA ACTGCCTCGG TCAGGAATGT CCGCACTATA AGGACTGTTT CGTGATGCAG
GCGCGCCGCG AAGCGCAGCA GGCCGATATC GTCGTCGTGA ATCACCATCT GTTTTTCGCC
GACATCATGT TGCGTGATAC GGGCATGGCC GAACTGCTGC CGACGGCGAA CACGGTCATC
TTCGACGAAG CGCATCAGCT GCCCGAAACC GCGACGCTGT TTTTCGGCGA GACGCTGTCG
ACCACGCAGT TTCTCGAACT CGCGCGCGAC TCGGTGGCCG AAGGTCTCGG TCACGCACGC
GACGCCGTCG ACTGGGTGAA GCTCGGGGCG GCGCTGGAGC GCTCCGCGCG CGACGTGCGG
CTCGCGTTCA AGGAAGATTC CGTGCGCCTG TCGATCGGAC AGTTGCCCGA CGATCATCCG
CTATTCCCCG CGCTCGAAGC TGTCGAAACC GAACTCGATG CACTCGCCAG CGCGCTCGCC
GGGCAGTCGG AACGGGCGGA GTCGCTGGGG GCGCTGCTGC GCCGTGCGCG CGAGTTGCAG
GAGGTGCTGG CCGGCTGGAC CGCGCCGCCG ACGGAAGCGG AACGTGACGC GGCATCCGAT
GCCGGAGCGG CACCAGAGAA AAGCGATCCA AACGAGAAGG TGCGCTGGAT AGAAGTGTTC
TCGCATACCG TTCAACTGCA TGAAACGCCG TTGTCGGTCG CCCCTATTTT CGCGAAGCAG
CGCGCGGGCG TGCCGCGCGC ATGGGTCTTC ACGTCGGCGA CGCTGTCCGT GCGCGGCGAC
TTCACGCACT ACGCAGCGCA GATGGGCCTC AATTCGCGCC GCTCGATGAC GCTGCCCAGT
CCCTTCGATT ACGGTACGCA GGGCTTGCTT TACGTGCCGC GCAATCTGCC GCAGCCGTCG
TCGCCGATGT TCACCGACGC CGTGTTCGAT GCCGCGCTGC CTGCCATCGA AGCGTCGGGT
GGCGGGGTGT TCATGCTCTG TACGACGCTG CGCGCCGTCG ATCGCATTGC ATCGAAATTG
CGCGACGTGA TCGAGTCGCG TGGCTGGAAC ATGCCGCTGC TCGTGCAGGG CGATGCAAGC
CGCACTGAAC TGCTTGATCG TTTTCGCTCG TATGGCAATG CGATCCTCGT GGGCAGCCAG
AGCTTCTGGG AAGGTGTGGA CGTGCGCGGC GATGCGTTGT CGCTCGTCGT GATCGACAAG
CTGCCATTCG CGCCGCCAGA CGACCCCGTG CTATCCGCGC GCCTCGATGC GCTGACGAAG
AAAGGTTTGA GTCCGTTTGC CGTGCATCAG CTGCCGCAGG CGGTGATTAC CCTTAAGCAG
GGCGCAGGGC GTCTGATCCG CTCGGAGACC GATCGCGGCG TGCTGATGAT CTGCGACACG
CGCCTCGTGG ACAAGCCGTA TGGACGCCGT ATATGGCAGA GCCTGCCGCC GTTCAAGCGC
ACGCGCGAGA TGGACGTCGT GCGCGAGTTT TTCGAAGAGC GGGGGCAGGC TTAA
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| Protein sequence | MNSPLQSSSR TASDDDASGA ASPASAERAT KGALGGGALA ASLTHKRSSE LADIFAADGL
LARQIDGYRP RASQIEMARA VAAAMEASGR AMPEPAMFEA QKRPARRLQH TSSASATDAP
ADQASSPEGA LEGGENTLIV EAGTGTGKTY AYLVPAMLWG GKVIVSTGTK HLQDQLFLRD
IPTVRDALAV PVSVAMLKGR ANYLCHYYLQ RTADNGRLPS RQETSYLQDI IRFAKITRTG
DKAELASVPE TAAVWSMVTS TRDNCLGQEC PHYKDCFVMQ ARREAQQADI VVVNHHLFFA
DIMLRDTGMA ELLPTANTVI FDEAHQLPET ATLFFGETLS TTQFLELARD SVAEGLGHAR
DAVDWVKLGA ALERSARDVR LAFKEDSVRL SIGQLPDDHP LFPALEAVET ELDALASALA
GQSERAESLG ALLRRARELQ EVLAGWTAPP TEAERDAASD AGAAPEKSDP NEKVRWIEVF
SHTVQLHETP LSVAPIFAKQ RAGVPRAWVF TSATLSVRGD FTHYAAQMGL NSRRSMTLPS
PFDYGTQGLL YVPRNLPQPS SPMFTDAVFD AALPAIEASG GGVFMLCTTL RAVDRIASKL
RDVIESRGWN MPLLVQGDAS RTELLDRFRS YGNAILVGSQ SFWEGVDVRG DALSLVVIDK
LPFAPPDDPV LSARLDALTK KGLSPFAVHQ LPQAVITLKQ GAGRLIRSET DRGVLMICDT
RLVDKPYGRR IWQSLPPFKR TREMDVVREF FEERGQA
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