Gene Bphy_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1398 
Symbol 
ID6242889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1570419 
End bp1571717 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content64% 
IMG OID642593181 
Productlysophospholipid transporter LplT 
Protein accessionYP_001857626 
Protein GI186476156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000295071 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAAG GTTTCTACAC GATCATCGCC GCACAGTTCG TGTCGTCGCT CGCCGATAAC 
GCGCTGCTGA TCGCGGCCAT CGCGCTGCTC ACCGAAATCC GCTCGCCCGC GTGGATGACG
CCGCTACTGC AAATCTTCTT CACGATTTCG TACGTCCTGC TCGCGCCCTT CGTGGGCGCA
TTCGCCGATG CGCTGCAAAA GCGCCACGTG ATGTTCGTCT CGAATGCGTT GAAGGCAGGT
GGCTGCCTGA TGATGATCGG CGGTGTGCAT CCGATGATCG CATATGGGGT GGTCGGCTTC
GGCGCGGCCG CATACTCCCC CGCGAAGTAC GGCATTCTGA CCGAACTGTT GCCCGCCGAA
CGGCTCGTCG CCGCGAACGC GTGGCTCGAA TCGGCAACCG TGCTGTCGAC CATCGTCGGC
ACGATGCTGG GCGGCGCGCT GATCAGCACC TATGCGTCGC ATCTGGTTCA GCATATGCAG
TGGCCGCTGA TCCATTCCGC CGCCGAGCTT GCAATGCTCG CGGTCATGAT CACCTACGCG
ATCGCCGCGG CGCTCAACGT CGGCATCCCC GACACCGGGG CGCGCTATCC GAACCGGCTG
GTCGAGCCCG GCGCGCTCGT CGGCGAGTTC GTGCGCTGTT TCAACGTGCT GTGGGCCGAC
CGCCTCGCGC AGATTGCGCT GTGGGTCACG ACGCTGATGT GGGGCGGTGC CGTCACGCTG
CAACTGCTCG TGCTCAAATG GGCGGATGTG AACCTCGGGT TGTCGCTTTC GAAGGCAGCC
GTCATACAGG GCGTCGCCGG CCTGGGCATT GCGATCGGCG CGGCGGCGGC CGCTGCGTGG
ATTCCGCTGC GCGCTTCGCT CAAGGTGCTG CCCGTCGGTC TGATCACGGG CGGTGTCGCT
ATCGCGATGG CCTTCTACAG CAAGAGCTTG TTTCCTCCCG GCGCCGGTCT GCGCGTGGGC
GAACTGTTTG CACCTGCTTA TCTGATCTTC GCGTATCCGT TGATGGTCTT GCTCGGCGCG
CTGTCGGGAT TTTTCATCGT GCCGATGAAC GCGATTCTCC AGCACCGCGG CGCGACGCTT
CTCACGGCGG GCCACTCGAT CGCCGTCCAG AACTTCAACC AGAACCTGGC CGTCCTGCTG
ATGCTCGGCG CCTACGCGAT CCTGCTGACG GCGAAAATGC CCGTGCAGTG GATCATCGCC
GTGTTCGGTC TGTTCATTAC CGGAATGATG TGGCTTGCGC AACGGCGCAG CGCCGCGAAC
GCGCACATGG TGGACATGCG CGCGCTCATC GAGGAATGA
 
Protein sequence
MKKGFYTIIA AQFVSSLADN ALLIAAIALL TEIRSPAWMT PLLQIFFTIS YVLLAPFVGA 
FADALQKRHV MFVSNALKAG GCLMMIGGVH PMIAYGVVGF GAAAYSPAKY GILTELLPAE
RLVAANAWLE SATVLSTIVG TMLGGALIST YASHLVQHMQ WPLIHSAAEL AMLAVMITYA
IAAALNVGIP DTGARYPNRL VEPGALVGEF VRCFNVLWAD RLAQIALWVT TLMWGGAVTL
QLLVLKWADV NLGLSLSKAA VIQGVAGLGI AIGAAAAAAW IPLRASLKVL PVGLITGGVA
IAMAFYSKSL FPPGAGLRVG ELFAPAYLIF AYPLMVLLGA LSGFFIVPMN AILQHRGATL
LTAGHSIAVQ NFNQNLAVLL MLGAYAILLT AKMPVQWIIA VFGLFITGMM WLAQRRSAAN
AHMVDMRALI EE