Gene Bphy_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1393 
Symbol 
ID6242884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1565794 
End bp1566288 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID642593176 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001857621 
Protein GI186476151 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00465366 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGAAC TACACACGAA CCACGGCGTC ATCAAGCTCG AACTGGACGC GGAAAAGGCG 
CCCAAGTCGG TCGAAAACTT CCTCGCCTAT GTGAAGGCCG GCCACTACGA CAATACGGTG
TTCCACCGCG TGATTGACGG CTTCATGATC CAGGGCGGCG GCTTCGAACC CGGCATGCAG
CAAAAGCCGA CGAATGCGCC GATCGCCAAC GAAGCAAACA ACGGTCTGAA GAACGTGAAG
GGCTCGATCG CCATGGCGCG CACGAACGAT CCGCATTCGG CAACGGCCCA GTTCTTCATC
AACGTGAACG ACAACGACTT CCTGAACCAC TCCTCCCCGA CGCCGCAGGG CTGGGGCTAT
GCAGTGTTCG GCAAGGTCGT CGAAGGCCTC GACGTGGTCG ATGCGATCCG CAAGGTGAAG
ACGGGTTCAA AGGGCTTCCA CCAGGACGTG CCCGTCGATG ACGTCATCAT CGAAAAGGCC
GTCGTGGTTG AGTAA
 
Protein sequence
MVELHTNHGV IKLELDAEKA PKSVENFLAY VKAGHYDNTV FHRVIDGFMI QGGGFEPGMQ 
QKPTNAPIAN EANNGLKNVK GSIAMARTND PHSATAQFFI NVNDNDFLNH SSPTPQGWGY
AVFGKVVEGL DVVDAIRKVK TGSKGFHQDV PVDDVIIEKA VVVE