| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1351 |
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| Symbol | |
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| ID | 6242842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1517107 |
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| End bp | 1518246 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642593128 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001857579 |
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| Protein GI | 186476109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.42322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA CTCTTGCCCT TACCGAAACC CTGATCGGCC GCGCGTCCGT CACGCCCGAC
GATCAGAACT GCCAGCACCT TCTGGTCGAG CGCCTGTCCG CGATCGGCTT CGAATGCGAA
ACGATCGAAT CGAACGGCGT GACGAATCTG TGGGCCGTCA AACGCGGCGC TGCGGGCAAG
GAAGGCAAGC TGCTCGCGTT CGCGGGCCAC ACAGATGTGG TGCCGACAGG CCCCGCCGAA
CAGTGGTCGT CCGCGCCCTT CGAGCCGACC CACCGCGACG GCAAGCTGTA CGGCCGCGGC
GCCGCCGACA TGAAGGCGTC GATTGCGGGC TTCGTGGTCG CGAGCGAGGA GTTCGTGGCC
GCGCATCCGC AGCATCGCGG CTCGCTCGCG CTGCTCATCA CGAGCGATGA AGAAGGTCCG
GCGACGGACG GCACCGTGAA GGTCGTCGAT GCGCTCGAAG CGCGCGGGGA GCGCATGGAC
TACTGCGTAG TGGGTGAGCC GACTTCGAGT GTGCGGTTCG GCGACATGGT GAAGAACGGT
CGCCGCGGCT CGATGTCGGG CAAGCTGACC GTCAAGGGTG TGCAAGGCCA CATCGCGTAT
CCGCATCTGG CGAAGAACCC GGTGCACCTG CTCGCGCCCG CGCTCGCCGA ACTGGTCGCC
GAGCACTGGG ACGAAGGCAA CGAATACTTC CCGCCCACTA CCTGGCAGGT GTCGAACCTG
CACAGCGGAA CGGGCGCGAC CAACATCATT CCCGGCCACG CCGAAGTGAT GTTCAACTTC
CGTTTTTCGA CGGCGAGCAC GGTCGAAGGC CTGCAAAGCC GCGTGCATCA GATTCTCGAC
AAACAGGGTC TCGACTACGA TCTGACGTGG ACCGTGAGTG GCCTGCCCTT TCTCACGCCG
CGCGGCGAGC TGTCGAACGC ACTCGAAAAA GCGATCTACG ACGAAACGGG CATCGCGACG
GAACTGTCGA CAACGGGCGG CACCTCGGAT GGCCGTTTCA TTGCGCGGAT CTGCAAGCAG
GTCATCGAAT TCGGTCCGTT GAATGCGAGC ATCCACAAGA TCGACGAACA TATCGAAGTC
GCACATATCG AGCCGCTCAA GAACGTCTAC CGACGCGTGC TCGAACAACT GATAGCCTGA
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| Protein sequence | MSGTLALTET LIGRASVTPD DQNCQHLLVE RLSAIGFECE TIESNGVTNL WAVKRGAAGK
EGKLLAFAGH TDVVPTGPAE QWSSAPFEPT HRDGKLYGRG AADMKASIAG FVVASEEFVA
AHPQHRGSLA LLITSDEEGP ATDGTVKVVD ALEARGERMD YCVVGEPTSS VRFGDMVKNG
RRGSMSGKLT VKGVQGHIAY PHLAKNPVHL LAPALAELVA EHWDEGNEYF PPTTWQVSNL
HSGTGATNII PGHAEVMFNF RFSTASTVEG LQSRVHQILD KQGLDYDLTW TVSGLPFLTP
RGELSNALEK AIYDETGIAT ELSTTGGTSD GRFIARICKQ VIEFGPLNAS IHKIDEHIEV
AHIEPLKNVY RRVLEQLIA
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