| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1349 |
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| Symbol | dapD |
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| ID | 6242840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1515816 |
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| End bp | 1516643 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642593126 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001857577 |
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| Protein GI | 186476107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.306449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC AACTTCAGCA GATCATCGAT AACGCCTGGG ACAACCGTGC CGACCTGTCG
CCGAAGGCCG CGCCCGCCGA TGTGCGGGAA GCCGTCGCGC ACGCCATCGA GCAGCTCGAC
AAGGGCGCAC TGCGCGTCGC GGAAAAGAAG GATGGCGACT GGGTCGTCAA CCAGTGGTTG
AAGAAGGCCG TCCTGCTGTC GTTCCGTCTC GAAGACAACG CACCGATGCC CGCCGGCGGC
TACTCCCAGT TCTACGACAA GGTGCCGTCG AAGTTCGCGA ACTACACCGC CGAAGACTTC
GCGGCAGGCG GCTTCCGCGT CGTGCCGCCC GCCATTGCGC GCCGCGGCTC GTACATCGCG
AAGAACGTCG TGCTGATGCC GTCGTACACC AACATCGGCG CGTACGTCGA CGAAGGCACG
ATGGTCGACA CCTGGGCCAC CGTCGGTTCG TGCGCGCAGA TCGGCAAGAA CGTGCACCTG
TCGGGCGGTG TGGGCATCGG CGGCGTGCTG GAGCCGCTGC AGGCCAACCC CGTCATCATC
GAAGACAACT GCTTCATCGG CGCGCGCTCG GAGGTCGTGG AAGGCGTGAT CGTCGAAGAG
AATTCGGTGA TCTCGATGGG CGTGTACCTG GGCCAGAGCA CGAAGATCTA TGACCGCGAA
ACGGGAGAAG TGTCGTACGG CCGCATTCCG GCGGGCTCGG TGGTGGTCGC GGGCAACCTG
CCGTCGAAGG ACGGTTCGCA CAGCCTGTAT TGCGCCGTGA TCGTCAAGAA GGTCGACGCC
AAGACGCGCG CAAAGGTCGG TCTGAACGAA CTGCTGCGAG GCGACTGA
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| Protein sequence | MSQQLQQIID NAWDNRADLS PKAAPADVRE AVAHAIEQLD KGALRVAEKK DGDWVVNQWL
KKAVLLSFRL EDNAPMPAGG YSQFYDKVPS KFANYTAEDF AAGGFRVVPP AIARRGSYIA
KNVVLMPSYT NIGAYVDEGT MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQANPVII
EDNCFIGARS EVVEGVIVEE NSVISMGVYL GQSTKIYDRE TGEVSYGRIP AGSVVVAGNL
PSKDGSHSLY CAVIVKKVDA KTRAKVGLNE LLRGD
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