Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1348 |
Symbol | |
ID | 6242839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1514417 |
End bp | 1515721 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642593125 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_001857576 |
Protein GI | 186476106 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.248718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACGC ATCCGGCCTT TGCGCCGATG CCGCCGCGCG CCGCCTTCAC CTGCGTCAGT CACGCCGAAC CACGCCCGAA CCGCCAAGTG AACCCGCTAC TCGACTCCCT TCAGCCTTAT CCGTTCGAAA AACTGCGCCT GCTCTTCAAG GACGTCACGC CGCCCGCGCA TCTCTCCCAT ATCAGCTTCG GAATCGGCGA GCCGAAACAT CCGACGCCTG AACTGATCCG CAAAGCGGTG ATCGATTCCC TCGGCGGTCT CGCGGCCTAT CCGGCGACTG TCGGCGCGCC GGCTTTGCGC GAAGCGATCG CGAAGTGGGT CACGACGCGC TACAACCTGC CGCCCGTCGA CGCTGCCACG CAGGTGTTGC CCGTGGCAGG CTCGCGCGAG GCGCTGTTCG CGCTCGCGCA AACGGTGATC GATCCGGGGA AAAGCGCCGG CGGCGAGCCT GCGATCGTAC TCTGTCCGAA CCCGTTCTAT CAAATCTACG AGGGCGCGGC GCTACTCGCG GGCGCTCAGC CGTACTTCGC CAACAGCGAC CCGACGCGCA ACTTCGCCTG CGACTACTCG GCCATCCCCG ACGACGTCTG GGCGCGCACC CAACTGCTGT ACGTCTGCTC GCCGGGCAAC CCGACGGGCG CGGTGCTGAC GCTCGACGAC TGGCGTGAGC TGTTCGAACT GTCGGACCGC CACGGCTTCG TGATCGCCTC CGACGAATGC TACTCCGAGA TCTATTTCGA CGAGTCGCGG CCGCCGCTCG GCGGGCTGGA AGCGGCGCAC AAACTCGGCC GCGGCTTCGA GCGGCTCGTG ATGCTGTCCA GCCTGTCGAA GCGCTCCAAC GTGCCGGGCA TGCGCTCGGG CTTCGTCGCA GGCGATGCGT CCATCCTCAA GCAGTTCCTG CTGTACCGCA CGTATCACGG CGCGGCGCTG TCGACCGTCT ATCAGACGGC CAGCATCGCC GCCTGGAACG ACGAAGCGCA CGTGCGCGAA AACCGCGCGA TGTACGCGCA GAAGTTTTCG ACCGTGACGC CGATGCTCGC CGGCGTGCTC CATGTCAAGC TGCCCGACGC CGCGTTCTAC CTATGGGCGA ACGTTGCGCG CACGGGGCTC TCGGATACCG CGTTCGCCCA GCGGCTGTAC GCCGACTATA ATGTGACGGT TCTGCCCGGC TCGTATCTCG CACGCACCGC GCACGACACG AACCCCGGCC GCGATTTTGT CCGCCTCGCG CTGGTCGCGG GCGTCGACGA ATGCACGGAG GGCGTGCAGC GCATCGTCGA ATTCTGCCGC TCGCTGGAAC GCTAG
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Protein sequence | MPTHPAFAPM PPRAAFTCVS HAEPRPNRQV NPLLDSLQPY PFEKLRLLFK DVTPPAHLSH ISFGIGEPKH PTPELIRKAV IDSLGGLAAY PATVGAPALR EAIAKWVTTR YNLPPVDAAT QVLPVAGSRE ALFALAQTVI DPGKSAGGEP AIVLCPNPFY QIYEGAALLA GAQPYFANSD PTRNFACDYS AIPDDVWART QLLYVCSPGN PTGAVLTLDD WRELFELSDR HGFVIASDEC YSEIYFDESR PPLGGLEAAH KLGRGFERLV MLSSLSKRSN VPGMRSGFVA GDASILKQFL LYRTYHGAAL STVYQTASIA AWNDEAHVRE NRAMYAQKFS TVTPMLAGVL HVKLPDAAFY LWANVARTGL SDTAFAQRLY ADYNVTVLPG SYLARTAHDT NPGRDFVRLA LVAGVDECTE GVQRIVEFCR SLER
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