| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1340 |
|---|
| Symbol | |
|---|
| ID | 6242831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1499680 |
|---|
| End bp | 1502259 |
|---|
| Gene Length | 2580 bp |
|---|
| Protein Length | 859 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593117 |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_001857568 |
|---|
| Protein GI | 186476098 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.490148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.451762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG TTCACGCTGT CGCCCATTCC GATGCCACGT CTCTCAAGGC GGATTACAAG
GTGGCCAAGA CCCCGCTGCT CGACCGCTTC AAGACCGCGT CCAACGTCGA CACGCTGATG
CGCTCGCTCG CGCGCATCAC CGACGACGCG CTGCGCGGCG CCTGGACGGC CTGCGACCTC
CCCGCCTCGC TGGCGCTGCT GGCCGTGGGC GGCTATGGGC GCGGCGAGCT GGCGCCCCAC
TCCGACATCG ACATTCTCGT GCTGCTGCCC GACGAGCCGA TGCCGCATCT CAATGCGCGT
ATCGAGCGCT TCATCGGCCT CGCATGGGAC CTGGGGCTGG AACTGGGCAG CAGCGTGCGT
ACGGTGTCGC AATGCATCGA AGAAGCGGCG AACGACGTCA CGGTGCAAAC CTCGCTGCTG
GAGGCGCGGC GCATCGTCGG CAGCACGACG CTGTTCGAGA GTTTTTCGCT GCGTTATCGC
GACGCGCTCG ATCCGCGCGC ATTCTTCCAG GCAAAAGTAC TGGAAATGCG CCAGCGGCAT
GCGAAATTCC AGGACACACC CTACGCGCTC GAACCGAACA TCAAGGAAAG CCCGGGCGGG
TTGCGCGATC TTCAGCTGAT TCTCTGGATC ACACAGGCGG CCGGCTTCGG CAGCAGCTGG
CGCGAACTCG ACGCACGTGG CCTGATCACC GACCGCGAAG CGCGCGAGCT GCGCCGCAAC
GAAGGCTTTC TGAAGACGCT GCGGGCGCGT CTACACGTGC TGGCGGGACG TCGCCAGGAC
ATTCTTGTGT TCGACGTGCA GACGCCGCTT GCCGAGAGCT TCGGCTTCAA GGCAACATCC
ACGCGCCGCG CCAGCGAGCA GTTGATGCGC CGTTACTACT GGGCCGCGAA AGCCGTCACG
CAACTGTCGA CCATTCTGAT CCAGAACATC GAAGCTCAGC TTTTTCCGAG CACGAGCGGC
ATCACGCGCG TTCTGTCAGA TCGCTTCGTC GAGAAACAGG GCATGCTGGA AATCGCCAGC
GACGATGTGT TCGAGCGCGA ACCGAACGCG ATCCTCGAGG CCTTCCTGCT GTACGAAGAA
ACGCCCGGCG TCAAAGGTCT GTCGGCGCGC ACCCTGCGCG CGTTGTACAA CGCGCGCGAC
AAGATGAATC ACCACTGGCG GCGCGACCCC GAAAATCGCC GCCTGTTCAT GGAAATCCTC
AAGCAGCCGC AGGGCATCAC GCATGCGATG CGTCTGATGA ACCAGACCAG CGTGCTCGGG
CGCTATCTGC TGAACTTCCG CCGCATCGTC GGACAGATGC AGCACGATCT GTATCACGTC
TACACGGTCG ATCAACATAT TCTGATGGTG CTTCGGAATA TGCGCCGCTT TGCGGTCGCC
GAGCATGCGC ACGAATATCC GTTCTGCAGC CAGCTGATCG CGAATTTCGA GCGGCCATAC
GTGCTCTACG TGGCTGCGCT GTTCCACGAC ATCGCGAAGG GTCGCGGTGG CGATCATTCG
ACGCTCGGCA TGGCCGACGC GCGCCGTTTC TGCCGCGATC ACGACATGTC GCCCGACGAC
ACGGCACTGG TCGTCTGGCT TGTCCAGCAT CACCTGACCA TGAGCCAGGT CGCGCAGAAG
CAGGACACGA GCGACCCGGA GGTGATCAAG CGTTTCGCCG ACCTGGTCGG CACCGAGCGG
CATCTCACCG GGCTATACCT GCTGACGGTC GCGGACATTC GCGGCACCAG CCCGAAAGTC
TGGAACACGT GGAAAGGCAA ACTGCTCGAA GACCTGTACC GCGCGACGCT CGCCGTGCTC
GGCGGCGCGC GTCCCGATGC GCACTCGGAA CTGAAGCAGC GCCAGGAAGA AGCCCTTGCG
CTGCTGCGGC TCGAAACGGT GCCCGAAAAC GCGCACCGTG CGCTGTGGGA CAAGCTCGAC
GTCGGCTATT TCCTGCGCCA TGACGCCGCC GACATCGCGT GGCAGACGCG CGTGCTGCAT
CGCCACGTCG AGACCGGGAC GCCGATCGTA CGCGCTCGCC CGTCACCTAT CGGCGAAGCG
CTGCAGGTGC TGGTCTACGT GAAGGATCGC CCCGACCTCT TCGCGGGCAT CTGCGCATAT
TTCGACCGCA ATTCGCTGTC CGTGCTCGAT GCACGTGTGA GCACGACCAA ACACGGTTAC
GCGCTCGACA ACTTCCTCGT GCAGCATACG GAGCGTGACG TCCACTATCG CGACATCGCC
AACCTTGTCG AACAGGAATT GGCGGAACGC CTGAGAGCGG AAGGCACGCT GTTGCCGGAG
CCGTCGAAAG GCCGTTTGTC GCGTCTGTCG CGCACGTTTC CCGTGACGCC GCGCGTCGAC
CTGAGGGCCG ACGAGCGCGG CCAGTATTAC ATCCTGTCCG TGTCGGCCAA CGACCGGCCG
GGCCTTCTTT ATTCGATCGC GCGCGTGCTG GCCGAGCACC GGGTCGGCGT CCATGCGGCG
CGGATCAATA CGCTCGGCGA ACGCGTCGAG GACGTGTTCC TGCTCGACGG ACACGGCCTC
TCGGACAACC GACGACAAAT CCAGGTTGAA ACGGAGCTGC TGCGCGCGAT CGCAGTGTGA
|
|---|
| Protein sequence | MSSVHAVAHS DATSLKADYK VAKTPLLDRF KTASNVDTLM RSLARITDDA LRGAWTACDL
PASLALLAVG GYGRGELAPH SDIDILVLLP DEPMPHLNAR IERFIGLAWD LGLELGSSVR
TVSQCIEEAA NDVTVQTSLL EARRIVGSTT LFESFSLRYR DALDPRAFFQ AKVLEMRQRH
AKFQDTPYAL EPNIKESPGG LRDLQLILWI TQAAGFGSSW RELDARGLIT DREARELRRN
EGFLKTLRAR LHVLAGRRQD ILVFDVQTPL AESFGFKATS TRRASEQLMR RYYWAAKAVT
QLSTILIQNI EAQLFPSTSG ITRVLSDRFV EKQGMLEIAS DDVFEREPNA ILEAFLLYEE
TPGVKGLSAR TLRALYNARD KMNHHWRRDP ENRRLFMEIL KQPQGITHAM RLMNQTSVLG
RYLLNFRRIV GQMQHDLYHV YTVDQHILMV LRNMRRFAVA EHAHEYPFCS QLIANFERPY
VLYVAALFHD IAKGRGGDHS TLGMADARRF CRDHDMSPDD TALVVWLVQH HLTMSQVAQK
QDTSDPEVIK RFADLVGTER HLTGLYLLTV ADIRGTSPKV WNTWKGKLLE DLYRATLAVL
GGARPDAHSE LKQRQEEALA LLRLETVPEN AHRALWDKLD VGYFLRHDAA DIAWQTRVLH
RHVETGTPIV RARPSPIGEA LQVLVYVKDR PDLFAGICAY FDRNSLSVLD ARVSTTKHGY
ALDNFLVQHT ERDVHYRDIA NLVEQELAER LRAEGTLLPE PSKGRLSRLS RTFPVTPRVD
LRADERGQYY ILSVSANDRP GLLYSIARVL AEHRVGVHAA RINTLGERVE DVFLLDGHGL
SDNRRQIQVE TELLRAIAV
|
|---|
| |