| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1304 |
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| Symbol | ldcA |
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| ID | 6242795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1463094 |
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| End bp | 1464020 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642593081 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_001857532 |
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| Protein GI | 186476062 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.504378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGGC ATCGCACCAT CGAACTGATT GCGCCCTCGG GCTATCCGCA CGATCCCAAT
GCGATTCATC TCGCGCTGAA GCGTCTGCGT GCGCAAGGGC ATCACGTGAA GAACGTCAGC
GCGGCGCAGC GTCGCTATCA GCGTTTTGCC GGCACGGACG GCGAGCGCGC AGCGGAATTG
AACCGTTTGG GCGACCCGTC GCGGGAACTG CCCGATATCG TGCTTGCCGT GCGCGGCGGA
TACGGCGCAG TGCGCATCCT GCACGGTCTC GACTACCGCG GCCTGCAACG CCGCCTGCGC
GATCAGCCCA TCGCGTTCTG CGGCCACAGC GATTTCACGG CGCTACAACT CGCGCTGCTG
TCTCAGGCCG GCGTGACGAC GTTTGGCGGC CCCATGCTCG CAGGCGATTT CGGCGCGGAA
AACGTCAGCG ACTTCACCAT GAAAAACTTC TGGCACGCGC TGACGTCCGA GACTTTCACG
ATTTCCAGCA CGACGCCGCA GGCGCAGACC ATCGATGTCA CGGGCACGCT ATGGGGCGGC
AACCTGGCCG TGCTCGCGTC GCTGGTCGGC TCGCCGTATA TGCCGCCCGT GGAAGGCGGC
ATCCTGTTCG TCGAGGACGT GAACGAACAG CCGTTCCGCA TCGAGCGGCT GATCTATCAG
CTGCATCTGG CCGGCATCCT TGAACGCCAG CAGGCGCTCA TGCTCGGCGA CTTCTCGGGC
GGCAAGCCTT TCGACTACGA TAACGGCTAC GACTTGTGCG CCATGGTCGA GCAGGTGAGG
TCGGTGATCG GCATTCCCAT CGTGACCGGC CTGCAATTCG GGCACATTCC CGATATGGTG
ACGCTGCCCG TCGGCGGCGA TGCTCGGCTC GTCGGGGGGG CGCATGGATT CAAACTCACG
GTCTCGGGCC ATCCTGTGCT CGATTGA
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| Protein sequence | MARHRTIELI APSGYPHDPN AIHLALKRLR AQGHHVKNVS AAQRRYQRFA GTDGERAAEL
NRLGDPSREL PDIVLAVRGG YGAVRILHGL DYRGLQRRLR DQPIAFCGHS DFTALQLALL
SQAGVTTFGG PMLAGDFGAE NVSDFTMKNF WHALTSETFT ISSTTPQAQT IDVTGTLWGG
NLAVLASLVG SPYMPPVEGG ILFVEDVNEQ PFRIERLIYQ LHLAGILERQ QALMLGDFSG
GKPFDYDNGY DLCAMVEQVR SVIGIPIVTG LQFGHIPDMV TLPVGGDARL VGGAHGFKLT
VSGHPVLD
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