| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1299 |
|---|
| Symbol | |
|---|
| ID | 6242790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1457656 |
|---|
| End bp | 1458177 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642593076 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001857527 |
|---|
| Protein GI | 186476057 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.255273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGA TGCAATACAC ACTGGACCAA CTGAACAGCC TGTCGGCCGA CGCGTTCGTT
GCAGCGCTGT CAGGCATCTT CGAACATTCG CCATGGGTTG CCGAAATCGC GGCGGCGCAG
CGTCCGTATG CGAGCATCGA CGCGTTGCAC AAGACGATGT CGAATGCCGT CGAAACAGCG
GGCGAGACGA AGCAGCTGGC GCTGATCAAC GCTCACCCGG AACTCGCGGG CAAAGCGGCC
GTGCGCGGCG AACTGACAGC CGAATCGACG CGTGAGCAAA GCGGCGCCGG ACTCGATCAA
TGCACGCAGG AAGAATTCGA TACGCTGCTG CGGCTGAACA CGGCGTATCG CGAGAAATTC
GGCTTCCCGT TCATTCTCGC CGTACGCGGC TATGACCGCC ACGGCATCAT CGCGAACTTC
GAAGCGCGCG TGAGCCACAG CCGCGCCGAC GAACTGCGGG CGAGCCTCGA CCAGATTTAT
CGCATCGCGC GTTTCCGTCT CGACGATCTG ATCGATGCGT GA
|
|---|
| Protein sequence | MKAMQYTLDQ LNSLSADAFV AALSGIFEHS PWVAEIAAAQ RPYASIDALH KTMSNAVETA
GETKQLALIN AHPELAGKAA VRGELTAEST REQSGAGLDQ CTQEEFDTLL RLNTAYREKF
GFPFILAVRG YDRHGIIANF EARVSHSRAD ELRASLDQIY RIARFRLDDL IDA
|
|---|
| |