Gene Bphy_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1282 
Symbol 
ID6242774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1438531 
End bp1439178 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID642593060 
ProductOmpW family protein 
Protein accessionYP_001857511 
Protein GI186476041 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.851458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CACTCCGATC GATCGCGGCC GCACTGTGCA CGGCAGGGCT GGCGCTGATC 
TCCGCGCACG CCTTTGCCGC CGACAGCGAC CCGACCGCAT CAGGTATCCA TGCCGGTGAC
GTGCTCGTGC GCCTGCGCGC CATCTCCATC GTGCCGCAGG TGCGCACCAG CGACGCATTG
TCCACGCTGA ATGTCGGCGT TAACAATGCG ACCGTGCCTG AACTCGACTT CACATACATG
ATCCGCGACA ACATCGGCGT CGAGCTGATT CTCGGCACAT CGCGGCATCA GGTGACCTCC
AGCCTCGGCG GGCTCGGCGG CGTCAACGTG CTGCCGCCTA CGCTGCTGTT GCAATATCAT
TTCAATCATC AGGGACAGGT CCGGCCGTAT GTAGGTGCGG GTGTGAACTA TACGTATTTC
TATAACGACG GACTGCATGT GGGCGATCAG CAGATTTCGG TCAAGCGCAG CAGCTTCGGT
CCGGCACTGC AGATGGGCGT CGACGTGCAA GTGACGAAAT CCCTGTTCGC CAACGTCGAT
CTGAAGAAGG TCTGGATGAA GACGGATGCA TCGCTCAATG GCGCATCGCT TGGCACGTTG
CATATCGATC CGTTGATCGT GGGCGTGGGT GTCGGGATGA AGTTCTGA
 
Protein sequence
MNTTLRSIAA ALCTAGLALI SAHAFAADSD PTASGIHAGD VLVRLRAISI VPQVRTSDAL 
STLNVGVNNA TVPELDFTYM IRDNIGVELI LGTSRHQVTS SLGGLGGVNV LPPTLLLQYH
FNHQGQVRPY VGAGVNYTYF YNDGLHVGDQ QISVKRSSFG PALQMGVDVQ VTKSLFANVD
LKKVWMKTDA SLNGASLGTL HIDPLIVGVG VGMKF