Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1282 |
Symbol | |
ID | 6242774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 1438531 |
End bp | 1439178 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642593060 |
Product | OmpW family protein |
Protein accession | YP_001857511 |
Protein GI | 186476041 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.851458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCA CACTCCGATC GATCGCGGCC GCACTGTGCA CGGCAGGGCT GGCGCTGATC TCCGCGCACG CCTTTGCCGC CGACAGCGAC CCGACCGCAT CAGGTATCCA TGCCGGTGAC GTGCTCGTGC GCCTGCGCGC CATCTCCATC GTGCCGCAGG TGCGCACCAG CGACGCATTG TCCACGCTGA ATGTCGGCGT TAACAATGCG ACCGTGCCTG AACTCGACTT CACATACATG ATCCGCGACA ACATCGGCGT CGAGCTGATT CTCGGCACAT CGCGGCATCA GGTGACCTCC AGCCTCGGCG GGCTCGGCGG CGTCAACGTG CTGCCGCCTA CGCTGCTGTT GCAATATCAT TTCAATCATC AGGGACAGGT CCGGCCGTAT GTAGGTGCGG GTGTGAACTA TACGTATTTC TATAACGACG GACTGCATGT GGGCGATCAG CAGATTTCGG TCAAGCGCAG CAGCTTCGGT CCGGCACTGC AGATGGGCGT CGACGTGCAA GTGACGAAAT CCCTGTTCGC CAACGTCGAT CTGAAGAAGG TCTGGATGAA GACGGATGCA TCGCTCAATG GCGCATCGCT TGGCACGTTG CATATCGATC CGTTGATCGT GGGCGTGGGT GTCGGGATGA AGTTCTGA
|
Protein sequence | MNTTLRSIAA ALCTAGLALI SAHAFAADSD PTASGIHAGD VLVRLRAISI VPQVRTSDAL STLNVGVNNA TVPELDFTYM IRDNIGVELI LGTSRHQVTS SLGGLGGVNV LPPTLLLQYH FNHQGQVRPY VGAGVNYTYF YNDGLHVGDQ QISVKRSSFG PALQMGVDVQ VTKSLFANVD LKKVWMKTDA SLNGASLGTL HIDPLIVGVG VGMKF
|
| |