| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1278 |
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| Symbol | |
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| ID | 6242770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1433875 |
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| End bp | 1435038 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642593056 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001857507 |
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| Protein GI | 186476037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.296404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.207657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACC AGTCGAACGT GCTGGCAGGG GCGGGCGTGT CGTCCTCGGG CAATTCCGCC
GCTGCGCAGG GCGCGGCGGA CCACTTCGTG CAGATCGTCG ACGTCGTGAA GAAATTCGGC
GAGACGGTCG CCGTCAAGGG CGTCAACCTG TCGGTCAGGA AAGGCGAGCT GTTCGCGCTG
CTCGGCAGTT CGGGTTGCGG CAAGTCCACG CTCTTGCGCA TGCTTGCAGG GCTGGAAACG
GTCACGTCGG GCAAGATCCT GATCGACGGC GAAGATCTCG CGCAGATGCC GCCGTACCGG
CGCCCCGTCA ACATGATGTT CCAGTCGTAT GCGCTCTTTC CGCATATGAC GGTCGAGTCC
AATGTCGCGT TCGGCCTGAA GCAGGAAGGT GTGGCGAAGG CCGAGCTCAA GGACCGTGTG
CAGTCCGCGC TCGAGCTGGT GCAGATGGGG CGCTTCGCGA AGCGCAAGCC GCATCAGCTA
TCGGGTGGGC AGCAGCAGCG CGTCGCGCTG GCGCGTTCGC TCGTCAAGCG TCCGAAGCTG
TTGCTGCTCG ACGAGCCGAT GTCCGCGCTC GACAAGCAGA TTCGCCAGCG CACGCAGATC
GAGCTCGTCA ACATTCTCGA CAAGGTTGGT GTCACCTGCA TCATGGTCAC GCATGACCAG
GAAGAAGCAA TGACGATGGC AGGCCGCCTC GCCGTGATGA GCGAGGGCGA GATCGTGCAG
CTTGGCACGC CGAGCGAAGT CTACGAGTAT CCGAACAGCC GCTTCTCGGC GGAATTCATC
GGCTCGACGA ATCTTTTCGA CGGCAATGTC GTCGAGGACG AACCGGATCA CGTATACATC
GAAACGCGGG ACCTCCCCGT GCGCCTGTAT GTGAGCCACG GCATCACGGG TCCCCTCGGC
ATGCCCGTGA CGATCTCGGT GCGCCCCGAG CGCATCGCCC TCACGCGCAA GCCGCCCGAA
GGGGCATTCA ACTGGGGCAA GGGCACGGTC ACCAACATCG CATACATGGG CGGATACTCG
CTGTACCACG TGAAGCTCGA CGGCGGAAAG ACCGTGATCG CGAACGTGTC GAGCCTCGCG
CTGTCGGAAA TCGAAACGCC TACCTGGGGC GATGAAGTGT ATGTGCGCTG GAGCGCGTCG
GCGGGCGTGG TGCTGACGTC ATGA
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| Protein sequence | MSDQSNVLAG AGVSSSGNSA AAQGAADHFV QIVDVVKKFG ETVAVKGVNL SVRKGELFAL
LGSSGCGKST LLRMLAGLET VTSGKILIDG EDLAQMPPYR RPVNMMFQSY ALFPHMTVES
NVAFGLKQEG VAKAELKDRV QSALELVQMG RFAKRKPHQL SGGQQQRVAL ARSLVKRPKL
LLLDEPMSAL DKQIRQRTQI ELVNILDKVG VTCIMVTHDQ EEAMTMAGRL AVMSEGEIVQ
LGTPSEVYEY PNSRFSAEFI GSTNLFDGNV VEDEPDHVYI ETRDLPVRLY VSHGITGPLG
MPVTISVRPE RIALTRKPPE GAFNWGKGTV TNIAYMGGYS LYHVKLDGGK TVIANVSSLA
LSEIETPTWG DEVYVRWSAS AGVVLTS
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