| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1277 |
|---|
| Symbol | |
|---|
| ID | 6242769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1432949 |
|---|
| End bp | 1433878 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642593055 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001857506 |
|---|
| Protein GI | 186476036 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.197627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.200022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCG CGCTGCATAC CTGCATGATG TGGCCTGTGC GCCGCTTCCG TCTGACAGGG
CGCACGGCCG TCGTCGCGGG GCCGTTCGTC TGGCTGCTGC TGTTTTTCCT CGTGCCGTTC
CTGCTGGTCG TGAAGATCAG CTTCGCGGAC CTGCAGCTCG GCATTCCGCC GTACACGGAG
CTGACGACGT TCAAGGAAGG CGTGATCCAT CTCGCGCTCG ACCTCTCACA CTACGCGTTT
CTGCTGACCG ACAGCCTGTA CTTCGCGACC TATGTGAACT CGGTGGTCGT CGCGGCGATC
TCGACGCTGC TGTGCCTGCT GCTCGGCTAT CCGATGGCGT ATTACATCGC GCGCTCGAAC
CCGGCCACGC GCAACATCCT GATGATGGCC GTGATGCTGC CGTTCTGGAC GTCGTTCCTG
ATCCGCGTGT ATGCGTGGAT CGGCATCCTC AAGAACAACG GGCTGCTGAA CAACTTCCTG
ATGTCGATCG GGCTGATTCA TTCGCCCATC GAGCTGTATC ACACGAATAC GGCTGTCTAT
ATCGGCATGG TGTATTCGTA CTTGCCGTTC CTCGTGATGC CGCTCTACGC GCATCTCGTG
AAGATGGACC TGACGTTGCT CGAAGCCGCG TACGACCTCG GCGCGCAACC TTGGACCGCG
TTCTGGCGCA TTACGCTGCC GTTGTCGAAA AACGGCATCA TTGCGGGCTG TTTGCTCGTG
TTCATCCCCG CGGTGGGCGA GTACGTGATT CCTGAACTGC TCGGCGGCGC GAATACGCTG
ATGATCGGCC GCGTGATGTG GAATGAGTTC TTCGACAACG CCGACTGGCC GATGGCATCC
GCCGTCACCT GCGCAATGGT GCTGCTGCTG CTCGTGCCGA TGGCGCTGTT CCAGTACTCG
CAGGCGAAGG AACTGGAGGA GAAGCGCTGA
|
|---|
| Protein sequence | MKSALHTCMM WPVRRFRLTG RTAVVAGPFV WLLLFFLVPF LLVVKISFAD LQLGIPPYTE
LTTFKEGVIH LALDLSHYAF LLTDSLYFAT YVNSVVVAAI STLLCLLLGY PMAYYIARSN
PATRNILMMA VMLPFWTSFL IRVYAWIGIL KNNGLLNNFL MSIGLIHSPI ELYHTNTAVY
IGMVYSYLPF LVMPLYAHLV KMDLTLLEAA YDLGAQPWTA FWRITLPLSK NGIIAGCLLV
FIPAVGEYVI PELLGGANTL MIGRVMWNEF FDNADWPMAS AVTCAMVLLL LVPMALFQYS
QAKELEEKR
|
|---|
| |