| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1267 |
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| Symbol | |
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| ID | 6242759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1419328 |
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| End bp | 1420821 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642593045 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001857496 |
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| Protein GI | 186476026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0196651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.750838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCT TTTCAATGAC CCGCACGTCT TGCGCAGTGG CGGCAGCTTC CCTGTTCGCG
ACGGCCTGCG CGTTCGGGCC GAGCGGCAAT CCGCCAGCGA TGCCCGAACC CGCGCATTAC
GGCGCCGAAG AACAGTCAAC GCAGACAGTG CCCGCGCAAG GCATCACGCA GCAGTTCGTC
GTCGGCGCAA ACGCGGTGCC GCAATGGTGG CGCACGTTTG AATCGAATGA ACTGAACGCG
CTCGTCGACG AAGGCCTGCG CAACAGCCCC ACGCTCGCCG CCGCCGACAG GAATCTGACG
GCAGCCCGCG AGCAGTTGCG GGCGCAGATC GGCAGCAACA TGCTGCCCGC CATCGACGCC
GGCGGCCAGG CTGCGCGCCA GCGCGCGCTC GGCATTCCCG AGGCCGGACC GAACACGTTT
CTGTACAACA CGTTCGTCGG CCAGTTGCAG GCGCAGTACA CGTTCGACAT CTTCGGCGCG
GCGCGGCTTG CGAACGCGGC GCTGGCCTCG CGTGTGAACG TGCAGGCGTT CCAGTTCAAC
GCGGCGCGCC GTGCGCTTGC TGCAAACATT GTGACGGCGG CCGTTTCCGC GGCGATGCTC
GATGCCCAGG TGAAGACCAC CGAACGCCTC GTCACGCTCG CCGACGAGCA GGCTCGCGAC
ACGCAGCGCC GCTACGATCT CGGCGCGGTA TCGCACAGCG ACCTGCTCAA TGCGCAGCAA
AGCGCGGCGT CGTTGGCGGC GAGTCTGCCC GCTGCGCGCC AGCAGCTGCT GACGACGCGT
CACGCGCTTG CCGTGCTGCT GGGCAGCACG CCGGACGCCG CGCCGCCGCC GCTCGATCTT
GCATCGTTGC ATGTGCCCGA ACGGGTGCCC GTGTCGGTGC CGTCCGATTT ACTGAAAGCG
CGCCCGGACA TCGAGGCCGC CGACGCGACG CTGAAGGCAG CCGCGGCCGA TGTCGGCGTC
GCGACGGCGC AGATGTATCC GAGCATCACG TTGAACGCGT CGATGGGCCA GGGCGGCTTC
AGCTGGCCCG TCGCGCTCTC GGGCGCGGGC GCGCTCTGGA GCATCGGCGC ATCGATCACG
CAGCCGATCT TTCACGGCGG CGCATTGTTT GCGCAGCGGC GCGCGGCGCT CGCTTCGTAT
GAAGCCGCCA CGTCGCAGTA CAAGCAAACG GTGCTGACTG CCTTTCAGAA CGTCGCCGAT
ACATTGGCTG CGTTGGAACA TGACGCGCAA TCGCTCGATG CGGCGAATGT GGCCGCGCGC
GCGGCGCAAC GCGCGTTCGA AGAGACGTCC GCGAAGTACC GATTGGGCGC CGTCCCCGTC
ACGTCGACGC GCTCCAGCGA GCAGCAATAC CTGAACGCGC GGCTCGACGA GATTCGCTAT
ACGGGCGCGC GTCTGAACGA TACGGCGGCG CTGTTCCAGG CGATGGGCAA TCCGCCTGCC
GAGGAGGCGC GCGCTGAGTC GGTGTCGACG GGTGCGGGAC CCATTGCACA GTGA
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| Protein sequence | MRLFSMTRTS CAVAAASLFA TACAFGPSGN PPAMPEPAHY GAEEQSTQTV PAQGITQQFV
VGANAVPQWW RTFESNELNA LVDEGLRNSP TLAAADRNLT AAREQLRAQI GSNMLPAIDA
GGQAARQRAL GIPEAGPNTF LYNTFVGQLQ AQYTFDIFGA ARLANAALAS RVNVQAFQFN
AARRALAANI VTAAVSAAML DAQVKTTERL VTLADEQARD TQRRYDLGAV SHSDLLNAQQ
SAASLAASLP AARQQLLTTR HALAVLLGST PDAAPPPLDL ASLHVPERVP VSVPSDLLKA
RPDIEAADAT LKAAAADVGV ATAQMYPSIT LNASMGQGGF SWPVALSGAG ALWSIGASIT
QPIFHGGALF AQRRAALASY EAATSQYKQT VLTAFQNVAD TLAALEHDAQ SLDAANVAAR
AAQRAFEETS AKYRLGAVPV TSTRSSEQQY LNARLDEIRY TGARLNDTAA LFQAMGNPPA
EEARAESVST GAGPIAQ
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