Gene Bphy_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1252 
Symbol 
ID6242744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1402165 
End bp1403439 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content63% 
IMG OID642593030 
Productmajor facilitator transporter 
Protein accessionYP_001857481 
Protein GI186476011 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.117112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCAT CGCTCGCGAT TCGCCGTTGG TGGACGATCA TGCCGATCGT CTTCATCACC 
TACAGCCTCG CCTATCTCGA CCGCGCGAAT TACGGCTTCG CGGCCGCCGC CGGCATCAAT
CAGGATCTCG GCATCAGCAA AGGACTGTCG TCGCTGATCG GCGCGCTGTT CTTTCTCGGC
TACTTTTTCT TCCAGATTCC CGGCGCGATC TACGCCGAAC GCAAGAGCGT CAAGAAGCTC
GTGTTCTGGA GCCTCGTTCT GTGGGGCGGC TGCGCGGCGC TGACGGGCGT CGTCAGCAAC
ATTCCATCGT TGATGGTCAT CCGCTTCCTG CTCGGCGTCG TCGAGGCGGC TGTGATGCCC
GCGATGCTGA TCTTCATCAG CAACTGGTTC ACGAAGCGCG AGCGCTCGCG TGCCAACACC
TTCCTGATTC TCGGCAACCC CGTGACGGTG CTGTGGATGT CGGTCGTGTC GGGCTATCTG
GTGCATTCGT TTGGCTGGCG CCACATGTTC ATCGCGGAAG GCTTGCCTGC GATCGTCTGG
GCCGTGTGCT GGTGGTTCAT CGTGAAAGAC AAACCGGAGC AGGTGTCGTG GCTGTCGGAG
GCGGACAAGA AACAGCTCGC CGACACGCTG CGCGCGGAGC AGTCCGCCAT CAAGCCGGTG
CGCAACTACG CCGAGGCGTT CCGCTCGTCG GCCGTGGTCA AGCTGTGCGC GCAGTACTTC
TGCTGGAGCA TCGGCGTGTA TGGCTTCGTG CTGTGGCTGC CGTCCATCCT GAAGAACGGC
TCGTCGCTCG GCATGGTCGA AACAGGCTGG CTGTCGGCGC TGCCGTATCT GGCTGCGACG
ATCGCGATGC TCGCGGCGTC GTGGGCGTCG GATAAACTCA GCAACCGGCG CGCGTTCGTC
TGGCCGTTCC TGCTGATCGG CGCGCTGGCT TTCGCGGGCT CGTACGCGCT CGGCTCGACG
CACTTCTGGA TGTCGTACGC GCTGCTCGTC GTTGCGGGCG CCGCGATGTA CGCGCCCTAT
GGACCGTTCT TCGCGATCGT GCCGGAACTG CTACCGAAGA ACGTCGCGGG CGGCGCGATG
GCGCTGATCA ACAGCATGGG CGCGCTCGGC TCGTTCGTCG GCTCGTATGT GGTCGGCTAT
CTGAACGGCG CGACGGGCTC GCCTGCTGCA TCATATGCGT TCATGAGCGT CGCGTTGCTT
GCCGCCGTAG TCCTGACGCT TGCCGTCAAG CCGCAGCCGA TGCAGACTCC GACACTCGCC
ACTCAAGGAA AGTGA
 
Protein sequence
MPSSLAIRRW WTIMPIVFIT YSLAYLDRAN YGFAAAAGIN QDLGISKGLS SLIGALFFLG 
YFFFQIPGAI YAERKSVKKL VFWSLVLWGG CAALTGVVSN IPSLMVIRFL LGVVEAAVMP
AMLIFISNWF TKRERSRANT FLILGNPVTV LWMSVVSGYL VHSFGWRHMF IAEGLPAIVW
AVCWWFIVKD KPEQVSWLSE ADKKQLADTL RAEQSAIKPV RNYAEAFRSS AVVKLCAQYF
CWSIGVYGFV LWLPSILKNG SSLGMVETGW LSALPYLAAT IAMLAASWAS DKLSNRRAFV
WPFLLIGALA FAGSYALGST HFWMSYALLV VAGAAMYAPY GPFFAIVPEL LPKNVAGGAM
ALINSMGALG SFVGSYVVGY LNGATGSPAA SYAFMSVALL AAVVLTLAVK PQPMQTPTLA
TQGK