| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1238 |
|---|
| Symbol | |
|---|
| ID | 6242730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1391053 |
|---|
| End bp | 1391691 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642593016 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001857467 |
|---|
| Protein GI | 186475997 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0801686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCA TCAACCAGTT TCCGCTTTTT CTCCTGGCCG TCACCGTGCT CAACCTGACG
CCCGGACCGG ATATCGCATA CGTCGCGGGC CAGAGCATCG CACAGGGCCG GCGCGCGGGC
CTGCTGTCCG CGCTGGGTGT CGCGTTCGGC GGCTGCATGC ATACGGTTGC GTGTGCGCTT
GGCATCACGG CGCTGCTAGC GGCGTCGCCG GGTGCCTTCA ATGCGATCAA GTGGATCGGC
GCTGCCTATC TGATGTATCT CGGGCTGCGC ATGGTGTGGC CCGCGGCGGC TGCCGTCGCC
AACGGCGATG CCGTGCCCGG CACACCGCGT CTGTCGCGCG GCACGCTGCT CTTTCGCGGC
TTCGTCACGA ACGCGTCGAA CCCGAAGGTG CTGCTGTTCT ATATCGCGTT CTTCCCGCAG
TTCGTCAGCG CGGACAGCCC GCACAAGACG CTCGCGTTTC TCGTGCTGGG CGCTGTGTTC
GTGACACTTG GCCTCGTCAA CGATTGCGTG ATCGCGTGGG TCGCCGCGAC GGCCGCACGC
GCCGTACGCT CGCAGCCTGC CGTGCGGCGC TGGATCGATC GCGTAGTGGG TGCAGGCTTC
ATCGGTCTTG GTGTGCGGCT CGCGCTGACC CGGCGTTGA
|
|---|
| Protein sequence | MFGINQFPLF LLAVTVLNLT PGPDIAYVAG QSIAQGRRAG LLSALGVAFG GCMHTVACAL
GITALLAASP GAFNAIKWIG AAYLMYLGLR MVWPAAAAVA NGDAVPGTPR LSRGTLLFRG
FVTNASNPKV LLFYIAFFPQ FVSADSPHKT LAFLVLGAVF VTLGLVNDCV IAWVAATAAR
AVRSQPAVRR WIDRVVGAGF IGLGVRLALT RR
|
|---|
| |