Gene Bphy_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1179 
Symbol 
ID6242677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1326190 
End bp1327614 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content60% 
IMG OID642592958 
Producthopanoid biosynthesis associated radical SAM protein HpnJ 
Protein accessionYP_001857414 
Protein GI186475944 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.846685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA CGCTATTTTT GCAGGCGCCG TCGTACGACG GTTTCGACGG CGGCGCGGGG 
TCGCGTTATC AGGCCAAGCG TGAAATCCGC TCGTTCTGGT ATCCGACCTG GCTCGCGCAG
CCGGCCGCGC TCGTGCCCGG CAGCCGCGTG CTCGATGCGC CCGCCGACGG TCTGTCTGTC
GAAGCATCGC TTGCCATTGC GCAAGAGTAT GAGGTGGTCG TGATTCACAC GAGCACGCCG
TCTTTTCCGA CGGATGCGCT CTTCGCCGAG CAGCTGAAAG CGCGCGCGCC GAAGGTGCTG
GTCGGTATGG TCGGCGCGAA GGTCGCCGTC GATCCGCACA ACTCGCTGAC GGCGAGCGAA
GCGATCGACT TCGTGTGCCG CGAGGAATTC GACTTCACCT GCAAGGAGAT CGCCGAAGGG
CTGCCGTTCG CGCAGATCAA GGGCTTGAGC TATCGCGCAG CGGACGGTTC GATCGAGCAC
AACGAAGCGC GCCCCATCCT CGAAAACATG GACGAACTGC CGTTCGTCGC GCCCGTCTAC
CAACGCGATC TGAAGATCGA CAACTATTTC ATCGGTTATC TGAAGCACCC GTATGTGTCG
ATCTACACGG GACGCGGCTG CCGTTCGCGC TGCACGTTCT GCCTGTGGCC GCAGACGGTG
GGCGGCCATC GCTACCGCAC GCGCTCGGTC GAGAACGTGC TCGAAGAAGT GAAGTGGATT
CGCGACAACA TGCCCGAAGT GAAGGAGATC ATGTTCGACG ACGACACCTT CACCGACTTC
AAACCGCGCG TGGAAGAGAT TGCGCGCGGT CTGGGCAAGC TTGGCGTCAC GTGGTCGTGC
AACGCGAAGG CGAACGTGCC GTACTCAACG CTCAAGATCA TGAAGGAGAA CGGCCTGCGC
CTGCTGCTGG TCGGCTATGA ATCGGGCGAC GACCAGATCC TGCTGAACAT CAAGAAGGGC
CTGCGCACCG ATATCGCGCG GCGCTTTTCC GAAGACTGCC GCAAGCTCGG CATTAAGATT
CACGGCACGT TCATTCTGGG CTTGCCGGGC GAAACGAAAG AGACGATCCA GAAAACCATC
GAATACGCGA AGGACATCAA CCCGCACACC ATTCAGGTGT CGCTCGCGGC GCCTTATCCC
GGCACGACGC TCTACCGGCA GGCCGTCGAG AACGGCTGGC TCGAAGAAAA CAAGGTGATC
AATCTCGTCA GCAAGGAAGG CGTGCAGCTC GCGGCGATCG GTTATCCGCA TCTGTCGCGC
GAAGAGATCT ATCACCATCT GGAGCAGTTC TACCGGCAGT TTTATTTCCG TCCGTCGAAG
ATCTGGGAAA TCGTGCGCGA GATGCTGGTG AGCTGGGAGA TGATGAAACG GCGTCTGCGC
GAAGGCGTCG AATTCTTCCG CTTCCTGCGG GCTCACGAGG CATGA
 
Protein sequence
MKKTLFLQAP SYDGFDGGAG SRYQAKREIR SFWYPTWLAQ PAALVPGSRV LDAPADGLSV 
EASLAIAQEY EVVVIHTSTP SFPTDALFAE QLKARAPKVL VGMVGAKVAV DPHNSLTASE
AIDFVCREEF DFTCKEIAEG LPFAQIKGLS YRAADGSIEH NEARPILENM DELPFVAPVY
QRDLKIDNYF IGYLKHPYVS IYTGRGCRSR CTFCLWPQTV GGHRYRTRSV ENVLEEVKWI
RDNMPEVKEI MFDDDTFTDF KPRVEEIARG LGKLGVTWSC NAKANVPYST LKIMKENGLR
LLLVGYESGD DQILLNIKKG LRTDIARRFS EDCRKLGIKI HGTFILGLPG ETKETIQKTI
EYAKDINPHT IQVSLAAPYP GTTLYRQAVE NGWLEENKVI NLVSKEGVQL AAIGYPHLSR
EEIYHHLEQF YRQFYFRPSK IWEIVREMLV SWEMMKRRLR EGVEFFRFLR AHEA