Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1160 |
Symbol | |
ID | 6242658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1300542 |
End bp | 1301864 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642592939 |
Product | major facilitator transporter |
Protein accession | YP_001857395 |
Protein GI | 186475925 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGG ATTCCGTCAC CGCGCATCAT CCCTCGCACG CGTCGCACGC GTCACACGAT GCCGGCCCGT CCGCCACGTC GGGCAAGGGC GTCGCGCGCC TGATCGTCGC CACGTCGATC GGCAATGCGC TCGAGTTCTA CGACCTGATC GTGTACGGCT ACTTCGCGAC CACGCTGTCG AAGCTGTTCT TTCCTGCACA CAACGCGACC GTCTCGCTGC TGCTCACGCT CGGCACCTTC GCGCTGTCGT ATCTCGCGCG GCCCATCGGC GCGCTCGTGC TCGGCTCGTA TAGCGACCGC AAGGGCCGCA AGGCATCGCT GACGCTATCG ATCGCCATGA TGACGCTCGG GACGGGGATG GTCGCGCTGA TGCCGACCTA CGCGACGATC GGCCTGCTCG CGCCTGTCGG CATTTTCGTG TCGCGCCTGT TGCAAGGTTT CTCGGCGGGC GGCGAATTCG GCAGCTCGAC GGCGTTCCTG ATCGAACACG CGCCCAGGCG CAGCGGCTTC ATGTCGAGCT GGCAGTTCTC CAGTCAGGGC GCGAGCACGT TGCTCGCGTC CGCGTTCGGC GCGGTGCTGA CGGGTATGCT CACGCCGCCG CAGCTGGAAG GCTGGGGTTG GCGCATTCCG TTTCTGTTCG GCATGCTGAT CGGTCCCGTC GGGCTCTATA TCCGCCGCCG CATCGACGAG ACGCCCGAAT TCGAGCGCGC CGAAAAAGCC GAGTCGCCCG TGCGCGAACT GCTCGCGACG CAAAAGTCGC GCGTGCTGGT GTCGATCGGC GCGCTCGTGC TGACGACGAC GGCCAATTAC ATGATCCTCT ACATGCCGAC TTACGCCTCG CGGCAACTCG GACTCGCACC GTCGTCGGGC TTCATCGCGA CGCTGATCGC AGGGTTGATC GTCACGGTGC TCACGCCCAT CGTCGGACAC TGGTCGGACA AGGTGGGCCG CACACGCATC ATGCTTGGCG CGGGTGCGCT CTTCTTCGTC ACGGTGTATC CCGCGTTCAT GTTCATGAAC GCGCACCCGT CGTTGCCGAC GCTGCTCGCC GCCGTCAGCT GGGTCGCGCT GCTGAAGGCC ACGTACTTCG CACCGATTCC CGCGTTGATG GCCGAACTCT TTCCGACCCG CACACGCACC ACGGGCATGG CCTTCGGCTA TAACATCGGC ACGACGATAT TCGGCGGTTT CACGCCGCTC GCGGTCGCGT CGCTGATCGC CGCGACGGGC AATAACCTCG CGCCGGGTCT CTATCTGATG ATGGCGGCCG TCATCAGCCT GCTGACCCTG GTCTGGGCGC GGGCGCGGCT GAACGCACAC TGA
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Protein sequence | MNMDSVTAHH PSHASHASHD AGPSATSGKG VARLIVATSI GNALEFYDLI VYGYFATTLS KLFFPAHNAT VSLLLTLGTF ALSYLARPIG ALVLGSYSDR KGRKASLTLS IAMMTLGTGM VALMPTYATI GLLAPVGIFV SRLLQGFSAG GEFGSSTAFL IEHAPRRSGF MSSWQFSSQG ASTLLASAFG AVLTGMLTPP QLEGWGWRIP FLFGMLIGPV GLYIRRRIDE TPEFERAEKA ESPVRELLAT QKSRVLVSIG ALVLTTTANY MILYMPTYAS RQLGLAPSSG FIATLIAGLI VTVLTPIVGH WSDKVGRTRI MLGAGALFFV TVYPAFMFMN AHPSLPTLLA AVSWVALLKA TYFAPIPALM AELFPTRTRT TGMAFGYNIG TTIFGGFTPL AVASLIAATG NNLAPGLYLM MAAVISLLTL VWARARLNAH
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