Gene Bphy_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1160 
Symbol 
ID6242658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1300542 
End bp1301864 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID642592939 
Productmajor facilitator transporter 
Protein accessionYP_001857395 
Protein GI186475925 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGG ATTCCGTCAC CGCGCATCAT CCCTCGCACG CGTCGCACGC GTCACACGAT 
GCCGGCCCGT CCGCCACGTC GGGCAAGGGC GTCGCGCGCC TGATCGTCGC CACGTCGATC
GGCAATGCGC TCGAGTTCTA CGACCTGATC GTGTACGGCT ACTTCGCGAC CACGCTGTCG
AAGCTGTTCT TTCCTGCACA CAACGCGACC GTCTCGCTGC TGCTCACGCT CGGCACCTTC
GCGCTGTCGT ATCTCGCGCG GCCCATCGGC GCGCTCGTGC TCGGCTCGTA TAGCGACCGC
AAGGGCCGCA AGGCATCGCT GACGCTATCG ATCGCCATGA TGACGCTCGG GACGGGGATG
GTCGCGCTGA TGCCGACCTA CGCGACGATC GGCCTGCTCG CGCCTGTCGG CATTTTCGTG
TCGCGCCTGT TGCAAGGTTT CTCGGCGGGC GGCGAATTCG GCAGCTCGAC GGCGTTCCTG
ATCGAACACG CGCCCAGGCG CAGCGGCTTC ATGTCGAGCT GGCAGTTCTC CAGTCAGGGC
GCGAGCACGT TGCTCGCGTC CGCGTTCGGC GCGGTGCTGA CGGGTATGCT CACGCCGCCG
CAGCTGGAAG GCTGGGGTTG GCGCATTCCG TTTCTGTTCG GCATGCTGAT CGGTCCCGTC
GGGCTCTATA TCCGCCGCCG CATCGACGAG ACGCCCGAAT TCGAGCGCGC CGAAAAAGCC
GAGTCGCCCG TGCGCGAACT GCTCGCGACG CAAAAGTCGC GCGTGCTGGT GTCGATCGGC
GCGCTCGTGC TGACGACGAC GGCCAATTAC ATGATCCTCT ACATGCCGAC TTACGCCTCG
CGGCAACTCG GACTCGCACC GTCGTCGGGC TTCATCGCGA CGCTGATCGC AGGGTTGATC
GTCACGGTGC TCACGCCCAT CGTCGGACAC TGGTCGGACA AGGTGGGCCG CACACGCATC
ATGCTTGGCG CGGGTGCGCT CTTCTTCGTC ACGGTGTATC CCGCGTTCAT GTTCATGAAC
GCGCACCCGT CGTTGCCGAC GCTGCTCGCC GCCGTCAGCT GGGTCGCGCT GCTGAAGGCC
ACGTACTTCG CACCGATTCC CGCGTTGATG GCCGAACTCT TTCCGACCCG CACACGCACC
ACGGGCATGG CCTTCGGCTA TAACATCGGC ACGACGATAT TCGGCGGTTT CACGCCGCTC
GCGGTCGCGT CGCTGATCGC CGCGACGGGC AATAACCTCG CGCCGGGTCT CTATCTGATG
ATGGCGGCCG TCATCAGCCT GCTGACCCTG GTCTGGGCGC GGGCGCGGCT GAACGCACAC
TGA
 
Protein sequence
MNMDSVTAHH PSHASHASHD AGPSATSGKG VARLIVATSI GNALEFYDLI VYGYFATTLS 
KLFFPAHNAT VSLLLTLGTF ALSYLARPIG ALVLGSYSDR KGRKASLTLS IAMMTLGTGM
VALMPTYATI GLLAPVGIFV SRLLQGFSAG GEFGSSTAFL IEHAPRRSGF MSSWQFSSQG
ASTLLASAFG AVLTGMLTPP QLEGWGWRIP FLFGMLIGPV GLYIRRRIDE TPEFERAEKA
ESPVRELLAT QKSRVLVSIG ALVLTTTANY MILYMPTYAS RQLGLAPSSG FIATLIAGLI
VTVLTPIVGH WSDKVGRTRI MLGAGALFFV TVYPAFMFMN AHPSLPTLLA AVSWVALLKA
TYFAPIPALM AELFPTRTRT TGMAFGYNIG TTIFGGFTPL AVASLIAATG NNLAPGLYLM
MAAVISLLTL VWARARLNAH