| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1157 |
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| Symbol | |
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| ID | 6242655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1296503 |
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| End bp | 1297642 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592936 |
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| Product | porin |
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| Protein accession | YP_001857392 |
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| Protein GI | 186475922 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TCATACTCTC GACCCTCTCG CTCACGCTGT TCGCCACGGC TGGCGCAGCA
CACGCTCAGA ACTCGGTGAC GCTGTACGGC CTGCTCGATA CGGGCCTGAC GTACACCAGC
AACGCCGGCG GCCACAGCAA TATCCAGCAG GCAAGCGGCA TCCTGAACGG CAACCGTTGG
GGCCTGCGCG GCTCGGAAGA TCTCGGCAAC GGGCTAAAGG CGATCTTCAC GTTGGAAAGC
GGCTTTAATC TGTCGACGGG CGCAATGGGG CAGAACAGCC GTCTGTTCGG CCGCCAGGCA
TTCGTCGGCC TGGCCAGCAA CCAGTACGGC GCGGTGACGC TCGGCCGCCA GTACGACAAC
CTCGTCGACA ACCTCGGCCC GCTGTCGCTG AACGGCACGC AATACGGCGG CACGCTCGCT
GCGCACCCGT ACGACAACGA CAACCTGAAC AACTCGTTCC GCGTCAGCAA CTCGGTCAAG
TATCAGAGCG TCGATTACGC CGGCTTCAAG GCGGGCGCGA TGTACGGCTT CTCGAACGAA
GCTGACGGCT TCTCGGACAA CCGCGCGTAT AGCGTCGGCG CATCGTATGC ATTCGGCGGT
CTGAAGGTCG CGGCAGCTTA TCTGCAACTG AACGGCGCAG GGTCGAACAA CACGAGCGGC
GCAGTGAGCA CCGACGCAAC CTTCACGGCT TCGCGTCAAC GCACGTACGG CGCGGGCGTC
AGCTATGCGT TCGGCCCTGC AAACGTCGGT TTCGTCTTTA CGCAGACGCA ACTCGCGAAC
GGCACCACTA TCGGCACGTC GGCATCGGGC AAGACGAGCG GCATCGCGCT GAACGGCACG
GGCGCGCACT TCACGAATTT CGAACTGAAC GGCCGCTACG CGATCACGCC GGCATGGTCT
CTGTCGGGCG CCTACACGTA CACCGATGCA AGCCTGCTCG GCGCACAGCC GAAGTACCAC
CAGGTCACGC TGCAAACCGA CTACGCACTG TCCAGGCGCA CCGACGTCTA CGCTGAGGCG
GCCTACCAGC ACGTCGGCAG CACGGGCAGC TCGGGCATCA CGGCGCACAT CGTCGGCGTC
AGCGCATCGT CGAGCGACTC GCAAGTGGTC GGCACCGTCG GTATCCGTCA CCGCTTCTAG
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| Protein sequence | MKKLILSTLS LTLFATAGAA HAQNSVTLYG LLDTGLTYTS NAGGHSNIQQ ASGILNGNRW
GLRGSEDLGN GLKAIFTLES GFNLSTGAMG QNSRLFGRQA FVGLASNQYG AVTLGRQYDN
LVDNLGPLSL NGTQYGGTLA AHPYDNDNLN NSFRVSNSVK YQSVDYAGFK AGAMYGFSNE
ADGFSDNRAY SVGASYAFGG LKVAAAYLQL NGAGSNNTSG AVSTDATFTA SRQRTYGAGV
SYAFGPANVG FVFTQTQLAN GTTIGTSASG KTSGIALNGT GAHFTNFELN GRYAITPAWS
LSGAYTYTDA SLLGAQPKYH QVTLQTDYAL SRRTDVYAEA AYQHVGSTGS SGITAHIVGV
SASSSDSQVV GTVGIRHRF
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