Gene Bphy_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1150 
Symbol 
ID6242648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1289934 
End bp1291013 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content62% 
IMG OID642592929 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_001857385 
Protein GI186475915 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAA AGCAGGACCC CAAAGATGAA GTGCAGGGCA TGCGTCGCGG CATGCTGCAA 
GGCGCCGCCC TGAGCGCGGT GATGGCGCTG CTTGGCGGCG CGGTCACGCC GGCGCAGGCC
GCCGAAGGCG GGCCGTTTCC CGCGCACAAG CGTTGGAAGA TCGTCTTCGT CAATCATGTG
ACGACGAATC CCTTTTTCGT CCCGACGCAA TACGGCATTC AGGACTCGAC CGCGATGCTC
GGCATGGACT ATCAGTGGAC GGGTTCGGCC AATGCCGACA TCGCCGAGAT GGTCAATGCC
GTCAACGCCG CGATTGCCGG GAAAGCCGAT GCGATCGCCG TGCCGATCGT CGACCCGAAA
GCGTTCGACA AGCCGATCCA GGCCGCGCTC GACGCGGGCA TTCCCGTGTT CGCTTACAAC
GCCGATGCGC CGCAGGGCTC CACGAATCCG CGGCTGAGCT ATATCGGCCA GGATCTGTAT
CTGTCCGGCT ATCAGATGGG CGAGCGCATC GCGAGCCTGA TCGACAGCGG TCTTGTCGGG
CTCTTCATCG CGACGCCGGG GCAGCTCAAC ATTCAGCCGC GCCTCGACGG CGCCGTCGCC
GCGATCAAGA AGTCGGGCAA GAAGATCGAT GTGCAGACCA TCGCGACGGG GGCGACGGTC
AACGAAGAAC TGTCGAAGAT CAAGTCGTTC TATCTGGGCC ATCAGGATCT GAAAGGCATG
TTCGCCGTCG ACGCGGGCAG CACGCAAGGC GTCGCCGAGG TGATGAAGGA AAACAATTTG
CCTTCGAAGG GCGTGCATGG CGGCGGCTTC GACCTGCTGC CGCGCACGGT TCAGTTGATC
CACGACGGCT TCCTCGACTT CACGATCGAT CAGCAGCCTT ACGTGCAAGG TTTCTATACC
GTGATGCAGG CGTTCGTGTA TCTCGCATCC GGCGGGCTCG TCGGGCCGGC CAACGTCAAC
ACGGGCCTGA AGTTCGTGAC GAAGGGTTCC GTCGATCCTT ACCTCAACAC GTCGACACGC
TACGAAGGCA AGAGCACGAA GCCTGAAATC GTGCCGCGCT CGGGAGCGAT CAAGGGGTGA
 
Protein sequence
MAGKQDPKDE VQGMRRGMLQ GAALSAVMAL LGGAVTPAQA AEGGPFPAHK RWKIVFVNHV 
TTNPFFVPTQ YGIQDSTAML GMDYQWTGSA NADIAEMVNA VNAAIAGKAD AIAVPIVDPK
AFDKPIQAAL DAGIPVFAYN ADAPQGSTNP RLSYIGQDLY LSGYQMGERI ASLIDSGLVG
LFIATPGQLN IQPRLDGAVA AIKKSGKKID VQTIATGATV NEELSKIKSF YLGHQDLKGM
FAVDAGSTQG VAEVMKENNL PSKGVHGGGF DLLPRTVQLI HDGFLDFTID QQPYVQGFYT
VMQAFVYLAS GGLVGPANVN TGLKFVTKGS VDPYLNTSTR YEGKSTKPEI VPRSGAIKG