Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1143 |
Symbol | |
ID | 6242641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1283440 |
End bp | 1284948 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642592922 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001857378 |
Protein GI | 186475908 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.36757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGT ACAGGCAACT GAGCAGCTTG ACTCACGAGC TTTTCCGCCA GGTCGTCGAA GCCGCGCCCA ACGCGATGGT GATGGCGGAT CGCGAAGGTC TCGTCGTGCT CGTGAACGTG CAGGCGGAAA AGCTCTTCGG CTATCCACGC AACGAACTGG TCGGAAATAG TGTCGATATG CTCGTCCCCG AGCGCATGCG CCGCGCGCAT CCCGAGTTCC GTCGCATGTT CTACGGCGAC CCGAGAAGCA GACCGATGGG GACGGGCCGT GATCTGTTTG CGCTACGAAA GGACGGTACC GAAGTTCCCG TCGAGATCGG CCTGAACCCT GTTACGACGA CGGAGGGCAT CTTCGTACTT GCAGCTATCG TCGACATCAC AGAACGCAGA CGCCTGGAGG AGCGCTTCCG GCAAGTGGTG GAAGCTGCGC CGAATGCGAT GGTAATGGTC GGGCAGGACG GAAAGATCGT TCTCGTGAAT GCGCAGACCG AGAACCTGTT CGGCTACAAC CGCGAGCAGC TCTTCGGGAA GTCGATCGAA ACACTCGTGC CGGAACGCTT TCGGAGAGGT CATGAGGTTT CGCGGAACGC CTATCTACAT GATCTGAAAC CGCGCCCGAT GGGCACGGGT CGCGATCTGT ACGGCCGTCG CCGGGATGGC TCGGAGTTTC CCGTGGAGAT CGGGCTCAAC CCCGTCAGAA CCTCCAATGA AAATTTCGTG CTCGCCGCCA TAGTCGACAT TACGGAGCGA AAGCGCGCGG AACACGAACT CATGCGCCGG ACAGAAGAGC TTGCGCGCTC AAACCAGGAT CTCGAACAGT TTGCGTACGT GGCGTCGCAC GATCTACAGG AACCGCTACG CGCCGTCGCG GGGCCCCTTC AGCTGCTTCA GCGCCGCTAT CAAGGACAAC TCGATGCGCG CGCGGAGGAG TTCATCACGC ATGCCGTAGA TGGCGCCACG CGAATGCAAA AGCTGATCGA CGACCTGCTC TCCTATTCCC GTGTCGGACG GTCGGGCGCG GTTCAGCAGT TGACTGCCTG TGCGGCCGCA CTTGATCAGG CACTGAAGAG CTTGAGCGTC GTGCTGCAGG AGTCCGGCGC GCAGATCACT CGGGATGCAC TGCCTTGCGT CATGGCCATT CCGACGCAAC TGGCGCTACT GTTTCAGAAT CTGGTCGGCA ATGCCGTCAA GTTTCGACAG GTCGATCGGC CTGTGCGCGT CGACATCGGT GCGCGCCGTG AGGGCGATAG TTGGGTCATT TCGGTAAAGG ACAATGGTAT CGGCATCGAC CCGCAATACT TCGACCGCAT ATTCATGATC TTTCAGCGCC TTCATTCCCG GGCCGATTAC CCAGGAACGG GCATCGGGCT CGCGCTATGC AAGCGTATCG TCGAGCAGCA TGGAGGAAGC ATCTGGATCG AGTCCCAACC GGGCGCCGGA ACGACGGTCT TCTTTACCTT GAAGGCGGAA GATCGTGAAG CCCGTATCCC ACCACAGCAT ACCCCGTAG
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Protein sequence | MEPYRQLSSL THELFRQVVE AAPNAMVMAD REGLVVLVNV QAEKLFGYPR NELVGNSVDM LVPERMRRAH PEFRRMFYGD PRSRPMGTGR DLFALRKDGT EVPVEIGLNP VTTTEGIFVL AAIVDITERR RLEERFRQVV EAAPNAMVMV GQDGKIVLVN AQTENLFGYN REQLFGKSIE TLVPERFRRG HEVSRNAYLH DLKPRPMGTG RDLYGRRRDG SEFPVEIGLN PVRTSNENFV LAAIVDITER KRAEHELMRR TEELARSNQD LEQFAYVASH DLQEPLRAVA GPLQLLQRRY QGQLDARAEE FITHAVDGAT RMQKLIDDLL SYSRVGRSGA VQQLTACAAA LDQALKSLSV VLQESGAQIT RDALPCVMAI PTQLALLFQN LVGNAVKFRQ VDRPVRVDIG ARREGDSWVI SVKDNGIGID PQYFDRIFMI FQRLHSRADY PGTGIGLALC KRIVEQHGGS IWIESQPGAG TTVFFTLKAE DREARIPPQH TP
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