| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1143 |
|---|
| Symbol | |
|---|
| ID | 6242641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1283440 |
|---|
| End bp | 1284948 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642592922 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001857378 |
|---|
| Protein GI | 186475908 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.36757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGT ACAGGCAACT GAGCAGCTTG ACTCACGAGC TTTTCCGCCA GGTCGTCGAA
GCCGCGCCCA ACGCGATGGT GATGGCGGAT CGCGAAGGTC TCGTCGTGCT CGTGAACGTG
CAGGCGGAAA AGCTCTTCGG CTATCCACGC AACGAACTGG TCGGAAATAG TGTCGATATG
CTCGTCCCCG AGCGCATGCG CCGCGCGCAT CCCGAGTTCC GTCGCATGTT CTACGGCGAC
CCGAGAAGCA GACCGATGGG GACGGGCCGT GATCTGTTTG CGCTACGAAA GGACGGTACC
GAAGTTCCCG TCGAGATCGG CCTGAACCCT GTTACGACGA CGGAGGGCAT CTTCGTACTT
GCAGCTATCG TCGACATCAC AGAACGCAGA CGCCTGGAGG AGCGCTTCCG GCAAGTGGTG
GAAGCTGCGC CGAATGCGAT GGTAATGGTC GGGCAGGACG GAAAGATCGT TCTCGTGAAT
GCGCAGACCG AGAACCTGTT CGGCTACAAC CGCGAGCAGC TCTTCGGGAA GTCGATCGAA
ACACTCGTGC CGGAACGCTT TCGGAGAGGT CATGAGGTTT CGCGGAACGC CTATCTACAT
GATCTGAAAC CGCGCCCGAT GGGCACGGGT CGCGATCTGT ACGGCCGTCG CCGGGATGGC
TCGGAGTTTC CCGTGGAGAT CGGGCTCAAC CCCGTCAGAA CCTCCAATGA AAATTTCGTG
CTCGCCGCCA TAGTCGACAT TACGGAGCGA AAGCGCGCGG AACACGAACT CATGCGCCGG
ACAGAAGAGC TTGCGCGCTC AAACCAGGAT CTCGAACAGT TTGCGTACGT GGCGTCGCAC
GATCTACAGG AACCGCTACG CGCCGTCGCG GGGCCCCTTC AGCTGCTTCA GCGCCGCTAT
CAAGGACAAC TCGATGCGCG CGCGGAGGAG TTCATCACGC ATGCCGTAGA TGGCGCCACG
CGAATGCAAA AGCTGATCGA CGACCTGCTC TCCTATTCCC GTGTCGGACG GTCGGGCGCG
GTTCAGCAGT TGACTGCCTG TGCGGCCGCA CTTGATCAGG CACTGAAGAG CTTGAGCGTC
GTGCTGCAGG AGTCCGGCGC GCAGATCACT CGGGATGCAC TGCCTTGCGT CATGGCCATT
CCGACGCAAC TGGCGCTACT GTTTCAGAAT CTGGTCGGCA ATGCCGTCAA GTTTCGACAG
GTCGATCGGC CTGTGCGCGT CGACATCGGT GCGCGCCGTG AGGGCGATAG TTGGGTCATT
TCGGTAAAGG ACAATGGTAT CGGCATCGAC CCGCAATACT TCGACCGCAT ATTCATGATC
TTTCAGCGCC TTCATTCCCG GGCCGATTAC CCAGGAACGG GCATCGGGCT CGCGCTATGC
AAGCGTATCG TCGAGCAGCA TGGAGGAAGC ATCTGGATCG AGTCCCAACC GGGCGCCGGA
ACGACGGTCT TCTTTACCTT GAAGGCGGAA GATCGTGAAG CCCGTATCCC ACCACAGCAT
ACCCCGTAG
|
|---|
| Protein sequence | MEPYRQLSSL THELFRQVVE AAPNAMVMAD REGLVVLVNV QAEKLFGYPR NELVGNSVDM
LVPERMRRAH PEFRRMFYGD PRSRPMGTGR DLFALRKDGT EVPVEIGLNP VTTTEGIFVL
AAIVDITERR RLEERFRQVV EAAPNAMVMV GQDGKIVLVN AQTENLFGYN REQLFGKSIE
TLVPERFRRG HEVSRNAYLH DLKPRPMGTG RDLYGRRRDG SEFPVEIGLN PVRTSNENFV
LAAIVDITER KRAEHELMRR TEELARSNQD LEQFAYVASH DLQEPLRAVA GPLQLLQRRY
QGQLDARAEE FITHAVDGAT RMQKLIDDLL SYSRVGRSGA VQQLTACAAA LDQALKSLSV
VLQESGAQIT RDALPCVMAI PTQLALLFQN LVGNAVKFRQ VDRPVRVDIG ARREGDSWVI
SVKDNGIGID PQYFDRIFMI FQRLHSRADY PGTGIGLALC KRIVEQHGGS IWIESQPGAG
TTVFFTLKAE DREARIPPQH TP
|
|---|
| |