Gene Bphy_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1117 
Symbol 
ID6242615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1264221 
End bp1264691 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID642592896 
ProductUspA domain-containing protein 
Protein accessionYP_001857352 
Protein GI186475882 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.656052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC AGATTCTGAT TGCACTGGAC GGTAGCAAGA CGTCGGAGCG GGTGCTGAAT 
GAGGCAGTGA AGATGGCGCG CCTCACGGGC GGGAAAATTC AGGCCGTGTA CGTGGTCGAC
AAGACGCCCC TGTTCAGTTA CGCAGGGTAC TACGATCCCA TCGCGCTCGT CGATGCACTG
CGTAAAGATG GCCGTATCAC GCTGGAGAAG GCGGAAGCGG CCTGCCGGCA GGCAGGGGTC
GCTTGCGATG CCGAAATGGT CGAGACGGAA CGGCTGAACG AGGACGTCGC CACCACGCTG
CAACATTGCG CCGAACGCCT CGGTGCGGAT CTTGTGATCC TGGGTACACA CGGCCGGCGA
GGCGTGCGCC GCATCGTGCT AGGCAGCGTG GCCGAGCGCT TTGTCCGGTT CGCGCAGTGT
CCTGTGCTGC TGGTGCGTGG CACCGAGCCG GAGCAGGCAG AGCAGCGCTA A
 
Protein sequence
MYKQILIALD GSKTSERVLN EAVKMARLTG GKIQAVYVVD KTPLFSYAGY YDPIALVDAL 
RKDGRITLEK AEAACRQAGV ACDAEMVETE RLNEDVATTL QHCAERLGAD LVILGTHGRR
GVRRIVLGSV AERFVRFAQC PVLLVRGTEP EQAEQR