| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1114 |
|---|
| Symbol | |
|---|
| ID | 6242612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1260671 |
|---|
| End bp | 1261966 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642592893 |
|---|
| Product | polyhydroxyalkanoate depolymerase, intracellular |
|---|
| Protein accession | YP_001857349 |
|---|
| Protein GI | 186475879 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
|---|
| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0599669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTACG CATTCATCGA TGGACAGCGG CGCCTCGCTC GCACGATTGC TAGCCAGATA
CAGTGCGGCG AAGTCTGGAG TACGGCGACG GCAGCATCCG CGACGGGTCC GGGTGTCGCG
GTGAGTGCGT TCCGTCACTG GCTCCTCAGG TCGACATGCG CATACCGGCA CGCACCGTCA
TTTGGAATTC GCGTCGTGGC GCACAGCGGA AACGGGATCG ACATTACAGA AACCGTTGTC
GATTCCGTGC CGACGGGCAC GCTGCGCAAG TTCACGCGGA CGGGCACTGC GCGTCAGGAT
CACACATGGC CCGTCATGCT TTGCGCACCG CTCGCGGGGC ATCACGCCGT CATGTTGCGC
GAAACCGTCG AGACGCTGCT CGAAGAGCGC GACGTGTTCG TATCGGATTG GGCCGACGCA
CGCGATGTGC CAAACGAAGC CGGTCCTCTG TCGCTCGACG ACTATGTGCT TGCACTGGAA
CGCTTCATGG ATTCGGCCAG TGCATGCGGA CCCCCGATAC ATGTCGTCGC CGTATGCCAG
GCCACCGTAC CCGCACTCGC CGCCGCAGCG TTGCTCGCAA GCGTGCGCAC AGTGCCCTTC
GCCAGCCTCT CGCTGATCGG AGGGCCCATC GATACCCGGA TCAGTCCAAC CGTGATCGAC
CGCTTCGCCG CATCGCACAC GCTCACATGG TTTCGCGAAC ATGTGATCGA CGTCGTTCCC
CCGCCGTATC GCGGCGCAGG AAGGCGCGTC TATCCCGGAT TCATCCAGCA CGGCGCCCTC
CTCTCGGCGC ATCCGGAGCG GCACGTCCGC CTCGAATCCG CGTACTGGTC GAACTGGCTG
GCAGGCGACA TGCGCGCCGC CGGCGAGGCG CTGCGGTCAC TGAACGAGTA CGCAGCCGTA
CTCGACATGG CGGAACGCTA TTTCCTCGAC ATCCTTCGCA TCGTTTTCCA GGAGCATTTG
CTGCCGCGCA ATACCTGGTG GGTTCAGGGC CGGCGCGTCG AACCGAAAGC GCTCTGCCGC
ACACCGCTGT GCACCGTGGA AGGCGAACTC GACGACATCA CAGGCGCAGG CCAGACGCAC
TGCGCACACA CATTGTGCGG CGCTTCCTCT TCGCCGCGCG ACGGGCAGAT CACTGTTCCT
GCGTGCAATC ACTATGACCT CTTCACCGGA CCGCGCTGGC GCGATGTCGT CCATCCGGCG
CTGTGCAGCT TCTGGCGGGA CGTCGAGGAC GCGGCGTCGA GCATGCCCGT CAGGCAGGAT
AAAGACAGGC CGACCCGTCG CAGGAGGCAC GCGTGA
|
|---|
| Protein sequence | MWYAFIDGQR RLARTIASQI QCGEVWSTAT AASATGPGVA VSAFRHWLLR STCAYRHAPS
FGIRVVAHSG NGIDITETVV DSVPTGTLRK FTRTGTARQD HTWPVMLCAP LAGHHAVMLR
ETVETLLEER DVFVSDWADA RDVPNEAGPL SLDDYVLALE RFMDSASACG PPIHVVAVCQ
ATVPALAAAA LLASVRTVPF ASLSLIGGPI DTRISPTVID RFAASHTLTW FREHVIDVVP
PPYRGAGRRV YPGFIQHGAL LSAHPERHVR LESAYWSNWL AGDMRAAGEA LRSLNEYAAV
LDMAERYFLD ILRIVFQEHL LPRNTWWVQG RRVEPKALCR TPLCTVEGEL DDITGAGQTH
CAHTLCGASS SPRDGQITVP ACNHYDLFTG PRWRDVVHPA LCSFWRDVED AASSMPVRQD
KDRPTRRRRH A
|
|---|
| |