| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1106 |
|---|
| Symbol | |
|---|
| ID | 6242604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1251132 |
|---|
| End bp | 1252988 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642592885 |
|---|
| Product | poly-beta-hydroxybutyrate polymerase domain-containing protein |
|---|
| Protein accession | YP_001857341 |
|---|
| Protein GI | 186475871 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC TTCCTCTCAC GGCCGACGAC CAACTTCAAT CATTGCCGGA GCATACCGCT
CGACTCACGA CGCGCAGCTC TGCGATACAC GCATCCCGAA GCAATACGCC GGGCCAGGCA
CCGGCCGGTT GTCACGGAGA AGGCGGTTCT CACCCGCTGC TTTCGCGCGA CGCGCTTGAC
CTCGCGGCGC ATGCGGGTGT CGCCGCGCTA ACGGGCGGCC TGTCCCCGAC GTCCGTGGCG
CTTGCCTTCC TGGATTGGGC GTTGCACATG GCAGTCGCGC CTGGGAGGAT GCTGGAGCTT
TCTGGCGAGG CCCTCCTGGC GAGCACGGAA GCTGCCCAGG GCGCGATGCG TACAAGCGTC
GCCCGTCCGA AGCATGGACA CGCGCCCGAG GATCCGCGCT TCGCAGATGA CGCCTGGGCG
GTCTGGCCGT TTCATGTGTA TCGCGACGGA TTTCTCAGAA TCCAGCACTG GTGGGAGATT
GCGACGACGG CCATACCGGG CGTCGAACAG CATCACGAGG AACTGGTGCG GTTCCTCGCT
CGCCAATGGC TGGATGCGTG CGCTCCCAGC AACTTCATCG CCACCAATCC CGTGGTGCAG
CGGGCGGCAT GGTCGAGCGG GGGTACGAGC TTTGTCACGG GGGCGATGCA CTGGCTTGCC
GATCTGCGCG ATCTTATGCA GGGCGGCTCC GGCGGCCAGC ACGCGCGCCC GTCCACCTGG
CTGCCGGGCA AGCACGTCGC CATCACACCC GGCAAGGTCG TCTGGCGCAG CGAGTTATGC
GAATTGCTAC AGTACGCGCC GACGACATCA ATGGTCGCGA AAGAACCCAT CCTGATCGTG
CCGTCGTGGA TCATGAAGTA CTACATTCTC GATCTTCAGC CACACGATTC GTTGATCCGC
TATCTCGTGG ACGCCGGCTA TACCGTCTAC ACGATTTCGT GGCGCAACCC CGGTGAATCG
TTCCGTGACG TCGGACTCGA CGCGTACCTG CAGGAAGGGT TGCTCGCAGC CCTCGCGCAA
GTGCGCGAGC GTGACGCGCA GCGGGTGCAC GTGGTCGGCT ATTGTCTCGG CGGAACCTTG
CTCGCCATCG CGGCGGCGGC GCTCTTTCGC GATGGCAGAG GAGATGAACT GAAAACCATG
ACACTGCTTG CCGCGCAGAC GGATTTCACC GAACCCGGAG AGCTTGGACT TTTCATCGAC
GCCAGCGAAC TCGCGGCACT CGATGCGTTG ATGTGGCGGC AGGGCTATCT CGACGGCTCG
CAGATGTCGG CGGCATTTCA ACTGCTCAAA GCACGGGATC TGGTCTGGTC GCGACTGATG
AGCGAGTATC TGCTCGGCCG CCGTTCGCAA GCGAATGACC TGATGGCATG GAACGCCGAT
ACGACCCGCC TGCCTTACCG GATGCACAGC GAGTATCTGA CCTGCCTTTT TCTCAACAAC
GATCTGGCGG AAGGACGCTA TTGCGTCGGC GGCCGGCCTG TTGCGCTGTC CGACATCGAA
GCGCCGGCGT TCGTCGTCGG CACCGAGCGC GACCATGTTT CGCCGTGGCG CTCGGTCTAC
AAGCTTCACC TGCTCACGCA CAACGAACTG ACGTTTCTGC TGACGGCGGG CGGACACAAC
GCAGGCATCG TGTCGCAGCC GGGACATCCC GAGCGCTATT ACCGCTGCGC AACGAGAGCA
GCCGCAGAGC CATATCGCGG CAGACAGGAG TTCCTCTCAG CCACCGAACC CGTCGATGGC
TCATGGTGGC CGAGATGGAA TGCGTGGCTG CGCGACCATT CGGACGGCGA GGTGGCCGGA
CGCGCGATCG TCGACGGACT GGAAGACGCG CCGGGCACCT ACGTGTTCGA GCGGTAG
|
|---|
| Protein sequence | MATLPLTADD QLQSLPEHTA RLTTRSSAIH ASRSNTPGQA PAGCHGEGGS HPLLSRDALD
LAAHAGVAAL TGGLSPTSVA LAFLDWALHM AVAPGRMLEL SGEALLASTE AAQGAMRTSV
ARPKHGHAPE DPRFADDAWA VWPFHVYRDG FLRIQHWWEI ATTAIPGVEQ HHEELVRFLA
RQWLDACAPS NFIATNPVVQ RAAWSSGGTS FVTGAMHWLA DLRDLMQGGS GGQHARPSTW
LPGKHVAITP GKVVWRSELC ELLQYAPTTS MVAKEPILIV PSWIMKYYIL DLQPHDSLIR
YLVDAGYTVY TISWRNPGES FRDVGLDAYL QEGLLAALAQ VRERDAQRVH VVGYCLGGTL
LAIAAAALFR DGRGDELKTM TLLAAQTDFT EPGELGLFID ASELAALDAL MWRQGYLDGS
QMSAAFQLLK ARDLVWSRLM SEYLLGRRSQ ANDLMAWNAD TTRLPYRMHS EYLTCLFLNN
DLAEGRYCVG GRPVALSDIE APAFVVGTER DHVSPWRSVY KLHLLTHNEL TFLLTAGGHN
AGIVSQPGHP ERYYRCATRA AAEPYRGRQE FLSATEPVDG SWWPRWNAWL RDHSDGEVAG
RAIVDGLEDA PGTYVFER
|
|---|
| |