Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1089 |
Symbol | |
ID | 6242587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1228794 |
End bp | 1230275 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642592868 |
Product | arginine/ornithine antiporter |
Protein accession | YP_001857324 |
Protein GI | 186475854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.505428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT CAGTGTCTCA ACCCGCATCC GGCTCGAAGG TGAGTCCGTC TAGTGCATCC GCGGCCGCTC CCAGGCTGCA TCTCGGCGCA CTGACAGCGC TGGTGGTGGG CTCCATGATC GGAGGCGGCA TCTTCTCGTT GCCGCAGAAC ATGGCTGTCA GCGCCGGCGC GGGCGCGGTG CTGATCGGAT GGGCAATTAC TGCCGTGGGC ATGCTGACAC TGGCCTTCGT GTTCCAGACG CTCGCGAATC GCAAGCCCGA ACTCGATGGC GGCGTGTATA TCTACGCGAA GCAAGGGTTC GGCGACTATA TGGGCTTCTC GTCGGCGTGG GGCTACTGGA TCAGCGCATG GCTCGGGAAC GTCGGCTACT TCGTCCTGCT GTTCGGCACC TTCGGCTACT TCTTTCCGGT TTTCGGCGAA GGCAATACGC CCGTCGCGAT CGCCTGCGCC TCGGTGTTGC TGTGGGGCGT TCATTTCCTC GTGCTGCAGG GCATCAAGGA AGCCGCGTTC GTGAACATGG TGACGACAAT CGCCAAGGTC GTGCCAATCG TTTTATTCAT CGTGATCTGC GCATTTGCGT TCAACGCACA CTTTTTCGCG AACGACTTTT TCGGCCTGAA CACGCCAAAA CTCGGGAGCG TAGCGAATCA GGTGCGAGGC ACGATGCTCG TGACAGTCTG GGTTTTTATC GGCATCGAAG GCGCCAGCAT TTTCTCTGCA CGCGCAGAAA AACGGACGGA CGTCGGCAAG GCGACGATCA TGGGGTTCAT TGGCGTACTG CTCGTTCTCG TACTCGTCAA CGTGCTGTCG CTCGGGATCA TGGCGCGACC TGATCTTGCC GCGCTGCAGA ACCCGTCGAT GGCTGGGGTG CTCGAGCATG TCGTGGGTCA CTGGGGTGCA ATTCTGATCA GTGTCGGCCT CGTCATTTCG CTGCTGGGCG CCCTGCTCTC GTGGGTTCTG CTTTGCGCCG AGATCATCTT TTCGGCTGCA AGGGACAACA CGATGCCGAG CTTCGTGCGC AAGGAAAATG CGAAGAAGGT TCCAGCGAAT GCGCTGTGGC TTACCAACGG CCTGACGCAG GCATTCCTGC TCATCACGCT TTTCTCCAAA GGGACCTACC TCTCGCTGAT CTATCTGGCA ACTTCAATGA TCCTGTTGCC CTACTTCTGG TCCGCGGCTT ATGCGTTGCG CGTCGCATGG CGCCGCGAAA CGTATGAGCA GGAGCCCGCC CAACGCAACA AGGACCTGGT GGTGGCAACC ATCGCGGTGA TCTATGCCGT GTGGCTGCTC TACGCGGGTG GACTCAAGTA TGTGTTGTTG TCGGCGCTTT TATATGCCCC CGGCGCCGTG CTGTTTGCCA AGGCGAAGCG CGAAACCGGG CAACCCGTGT TCACGCTGAT GGAAAAGCTG GTCTTCGCCG CGGTCGTGGC AGGAGCACTG GTGGCGGCAT TCGGCCTTTA CAAGGGCTTC CTCACGCTCT GA
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Protein sequence | MSDSVSQPAS GSKVSPSSAS AAAPRLHLGA LTALVVGSMI GGGIFSLPQN MAVSAGAGAV LIGWAITAVG MLTLAFVFQT LANRKPELDG GVYIYAKQGF GDYMGFSSAW GYWISAWLGN VGYFVLLFGT FGYFFPVFGE GNTPVAIACA SVLLWGVHFL VLQGIKEAAF VNMVTTIAKV VPIVLFIVIC AFAFNAHFFA NDFFGLNTPK LGSVANQVRG TMLVTVWVFI GIEGASIFSA RAEKRTDVGK ATIMGFIGVL LVLVLVNVLS LGIMARPDLA ALQNPSMAGV LEHVVGHWGA ILISVGLVIS LLGALLSWVL LCAEIIFSAA RDNTMPSFVR KENAKKVPAN ALWLTNGLTQ AFLLITLFSK GTYLSLIYLA TSMILLPYFW SAAYALRVAW RRETYEQEPA QRNKDLVVAT IAVIYAVWLL YAGGLKYVLL SALLYAPGAV LFAKAKRETG QPVFTLMEKL VFAAVVAGAL VAAFGLYKGF LTL
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