Gene Bphy_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1080 
Symbol 
ID6242578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1216318 
End bp1217163 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content63% 
IMG OID642592859 
Producthypothetical protein 
Protein accessionYP_001857315 
Protein GI186475845 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.431343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.325295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACG CCACGAATCA GCCTTGCATC ATCTCCGTCG CGATCACGGG CTCCGTGCCG 
CGCAAGAAGG ACAATCCGGC CGTGCCGATC TCGGTGCCCG AGCAGGTCGA GAGCACGCAT
GAAGCGTACG AAGCGGGCGC AACGCTCGTG CATCTGCACG TGCGCGACGA GGAGGAGCGC
TCGAGCTCCG ACCGCAACAG CTTCGCGGCG TTGCAGGAGG GCATTCGCAA ACATTGCCCC
GACATCATCG TCCAGTTCTC GACGGGCGGC CGCGGCCGTT CGTTCGAGCA GCGCGGCGCG
ATGCTCGACC TGCGTCCCGA CATGGCGTCG CTCGCGACGG GCTCGGTGAA CTTCCCGACT
ACCGTCTACG AGAATCCCCC CGATTTCGTG CGCATGCTCG CGCAGACGAT GCTCGATCAT
GATGTGAAAC CCGAAATCGA AATCTTCGAT CTGGCCATGC TGTACAGCAC CGTCGATCTC
GTGCAGCAGG GCTTGCTGAA AGAGCCTGTG CACGTGCAGT TCGTGATGGG CGTGAAGAAC
GCGCTGCCAG CGCGCCGCGA GATTCTCGAA TTCGAAGTCG AACAACTGAA GAAACTGCTG
CCAACGGCAA CGTGGACCGC GGCGGGTATC GGCCGTCACC AGCTCGAAGT GAATCACTGG
ACCCTCGAAA TGGGCGGCCA TTGCCGCACG GGTCTGGAAG ACAACGTGCG CTGGGACAAG
GACACGCTGG CGAAAAGCAA CGCGCAGCTC GTGCAGCGCG TCGCGGATCT GTGCGGCCAG
TACGGCCGCC CCGTGGCGAC CGCGAAACAG GCCCGCGAAA TGTTGGCGCT CAGGCCCGCT
GCGTGA
 
Protein sequence
MSHATNQPCI ISVAITGSVP RKKDNPAVPI SVPEQVESTH EAYEAGATLV HLHVRDEEER 
SSSDRNSFAA LQEGIRKHCP DIIVQFSTGG RGRSFEQRGA MLDLRPDMAS LATGSVNFPT
TVYENPPDFV RMLAQTMLDH DVKPEIEIFD LAMLYSTVDL VQQGLLKEPV HVQFVMGVKN
ALPARREILE FEVEQLKKLL PTATWTAAGI GRHQLEVNHW TLEMGGHCRT GLEDNVRWDK
DTLAKSNAQL VQRVADLCGQ YGRPVATAKQ AREMLALRPA A