Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1080 |
Symbol | |
ID | 6242578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1216318 |
End bp | 1217163 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642592859 |
Product | hypothetical protein |
Protein accession | YP_001857315 |
Protein GI | 186475845 |
COG category | [S] Function unknown |
COG ID | [COG3246] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.431343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.325295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACG CCACGAATCA GCCTTGCATC ATCTCCGTCG CGATCACGGG CTCCGTGCCG CGCAAGAAGG ACAATCCGGC CGTGCCGATC TCGGTGCCCG AGCAGGTCGA GAGCACGCAT GAAGCGTACG AAGCGGGCGC AACGCTCGTG CATCTGCACG TGCGCGACGA GGAGGAGCGC TCGAGCTCCG ACCGCAACAG CTTCGCGGCG TTGCAGGAGG GCATTCGCAA ACATTGCCCC GACATCATCG TCCAGTTCTC GACGGGCGGC CGCGGCCGTT CGTTCGAGCA GCGCGGCGCG ATGCTCGACC TGCGTCCCGA CATGGCGTCG CTCGCGACGG GCTCGGTGAA CTTCCCGACT ACCGTCTACG AGAATCCCCC CGATTTCGTG CGCATGCTCG CGCAGACGAT GCTCGATCAT GATGTGAAAC CCGAAATCGA AATCTTCGAT CTGGCCATGC TGTACAGCAC CGTCGATCTC GTGCAGCAGG GCTTGCTGAA AGAGCCTGTG CACGTGCAGT TCGTGATGGG CGTGAAGAAC GCGCTGCCAG CGCGCCGCGA GATTCTCGAA TTCGAAGTCG AACAACTGAA GAAACTGCTG CCAACGGCAA CGTGGACCGC GGCGGGTATC GGCCGTCACC AGCTCGAAGT GAATCACTGG ACCCTCGAAA TGGGCGGCCA TTGCCGCACG GGTCTGGAAG ACAACGTGCG CTGGGACAAG GACACGCTGG CGAAAAGCAA CGCGCAGCTC GTGCAGCGCG TCGCGGATCT GTGCGGCCAG TACGGCCGCC CCGTGGCGAC CGCGAAACAG GCCCGCGAAA TGTTGGCGCT CAGGCCCGCT GCGTGA
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Protein sequence | MSHATNQPCI ISVAITGSVP RKKDNPAVPI SVPEQVESTH EAYEAGATLV HLHVRDEEER SSSDRNSFAA LQEGIRKHCP DIIVQFSTGG RGRSFEQRGA MLDLRPDMAS LATGSVNFPT TVYENPPDFV RMLAQTMLDH DVKPEIEIFD LAMLYSTVDL VQQGLLKEPV HVQFVMGVKN ALPARREILE FEVEQLKKLL PTATWTAAGI GRHQLEVNHW TLEMGGHCRT GLEDNVRWDK DTLAKSNAQL VQRVADLCGQ YGRPVATAKQ AREMLALRPA A
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