Gene Bphy_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1040 
Symbol 
ID6242538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1169504 
End bp1170325 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID642592819 
Producthypothetical protein 
Protein accessionYP_001857275 
Protein GI186475805 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.285411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTGA TCGTGTTCGA CTGGCGTCCT GACGCGTCCG ATAGTCCGCT GTTCACGCTC 
ACCGCGAATC GCGACGAATT CCTGAAGCGC ACAGCCCAGC CGATGCATTG GTGGGACGAC
GCTCCCGGCC TGCTGGCGGG CCGCGACCTG GTCGGCGGCG GGACCTGGCT GGGCATGACA
CGCGACGGCC GGTTCGCTGC CCTCACTAAC TATCGCGCGC CGAGCGAAAT GCGCGCCGAT
GCGCCGACGC GTGGCACGCT GGTCAGCAAC TGGCTGTCCG GCGAGCGCGG CATCGAAAGC
GGCGCGCCGC TCGATTATCT GCTGCGCGTC GCGCAAGACG GTGACATGTA CAACGGCTTC
AATCTGCTGG TCGGCGACTG GACGCGGCGC GAACTGGCCT GGTATTGCAA CCGCTCGCCT
GCCGCGCCGG CGCTGCTCGC GCCGGGCACG CACGGCATCT CCAATGCAGT ACTCGATACG
CCTTGGCCGA AGCTGGTGCG CAAGCGCGCC GAACTCGCAC GGACGCTCGC CGACGACAGC
CGTCCGCCGC TCACGACGCT GATCGGCCTG ATGCGCGATC CGCGTGTTGC ACGCGACGAC
GAACTGCCCG CCACGGGAAT ATCGCTCGAA CGCGAACGCG CGCTGTCGGC CGCCTTCATC
GATACGCCCG AATACGGCAC ACGCGGCACG ACGGCAATGC AGGTCGTCGC GCAACACAAA
CGCCTGAGCG TGTCGGCACT CGAGCGCAGC GACGACAACG GCTCGCATCG CGTCAAACGC
CCCGGCGATT ACGAGCGCAG CTTCACCTTC GACATCGCCT GA
 
Protein sequence
MCLIVFDWRP DASDSPLFTL TANRDEFLKR TAQPMHWWDD APGLLAGRDL VGGGTWLGMT 
RDGRFAALTN YRAPSEMRAD APTRGTLVSN WLSGERGIES GAPLDYLLRV AQDGDMYNGF
NLLVGDWTRR ELAWYCNRSP AAPALLAPGT HGISNAVLDT PWPKLVRKRA ELARTLADDS
RPPLTTLIGL MRDPRVARDD ELPATGISLE RERALSAAFI DTPEYGTRGT TAMQVVAQHK
RLSVSALERS DDNGSHRVKR PGDYERSFTF DIA